1t6y: Difference between revisions

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[[Image:1t6y.gif|left|200px]]


{{Structure
==Crystal structure of ADP, AMP, and FMN bound TM379==
|PDB= 1t6y |SIZE=350|CAPTION= <scene name='initialview01'>1t6y</scene>, resolution 2.80&Aring;
<StructureSection load='1t6y' size='340' side='right'caption='[[1t6y]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=ADP:ADENOSINE-5'-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene> and <scene name='pdbligand=FMN:FLAVIN MONONUCLEOTIDE'>FMN</scene>
<table><tr><td colspan='2'>[[1t6y]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T6Y OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1T6Y FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
|GENE=  
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>
}}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1t6y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t6y OCA], [https://pdbe.org/1t6y PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1t6y RCSB], [https://www.ebi.ac.uk/pdbsum/1t6y PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1t6y ProSAT], [https://www.topsan.org/Proteins/BSGC/1t6y TOPSAN]</span></td></tr>
 
</table>
'''Crystal structure of ADP, AMP, and FMN bound TM379'''
== Function ==
 
[https://www.uniprot.org/uniprot/Q9WZW1_THEMA Q9WZW1_THEMA]
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
1T6Y is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T6Y OCA].  
Check<jmol>
[[Category: Single protein]]
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/t6/1t6y_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1t6y ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Thermotoga maritima]]
[[Category: Thermotoga maritima]]
[[Category: BSGC, Berkeley Structural Genomics Center.]]
[[Category: Kim R]]
[[Category: Kim, R.]]
[[Category: Kim S-H]]
[[Category: Kim, S H.]]
[[Category: Shin DH]]
[[Category: Shin, D H.]]
[[Category: Wang W]]
[[Category: Wang, W.]]
[[Category: Yokota H]]
[[Category: Yokota, H.]]
[[Category: ADP]]
[[Category: AMP]]
[[Category: FMN]]
[[Category: berkeley structural genomics center]]
[[Category: bsgc structure funded by nih]]
[[Category: crystal; fad synthetase; adp; amp; fmn; x-ray crystallography; structural genomic]]
[[Category: protein structure initiative]]
[[Category: psi]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 14:14:36 2008''
Retrieved from "https://proteopedia.org/1t6y"