1vp8: Difference between revisions

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[[Image:1vp8.gif|left|200px]]


{{Structure
==CRYSTAL STRUCTURE OF an alpha/beta domain of a putative pyruvate kinase (AF0103) FROM ARCHAEOGLOBUS FULGIDUS DSM 4304 AT 1.30 A RESOLUTION==
|PDB= 1vp8 |SIZE=350|CAPTION= <scene name='initialview01'>1vp8</scene>, resolution 1.30&Aring;
<StructureSection load='1vp8' size='340' side='right'caption='[[1vp8]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene> and <scene name='pdbligand=UNL:'>UNL</scene>
<table><tr><td colspan='2'>[[1vp8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Archaeoglobus_fulgidus_DSM_4304 Archaeoglobus fulgidus DSM 4304]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VP8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VP8 FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3&#8491;</td></tr>
|GENE= NP_068944.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224325 Archaeoglobus fulgidus DSM 4304])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
}}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vp8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vp8 OCA], [https://pdbe.org/1vp8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vp8 RCSB], [https://www.ebi.ac.uk/pdbsum/1vp8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vp8 ProSAT], [https://www.topsan.org/Proteins/JCSG/1vp8 TOPSAN]</span></td></tr>
 
</table>
'''Crystal structure of a FMN-binding protein (NP_068944.1) from Archaeoglobus fulgidus at 1.30 A resolution'''
== Function ==
 
[https://www.uniprot.org/uniprot/O30133_ARCFU O30133_ARCFU]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
1VP8 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Archaeoglobus_fulgidus_dsm_4304 Archaeoglobus fulgidus dsm 4304]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VP8 OCA].  
Check<jmol>
[[Category: Archaeoglobus fulgidus dsm 4304]]
  <jmolCheckbox>
[[Category: Single protein]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vp/1vp8_consurf.spt"</scriptWhenChecked>
[[Category: JCSG, Joint Center for Structural Genomics.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: FMN]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: UNL]]
  </jmolCheckbox>
[[Category: hypothetical protein]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vp8 ConSurf].
[[Category: jcsg]]
<div style="clear:both"></div>
[[Category: joint center for structural genomic]]
__TOC__
[[Category: np_068944 1]]
</StructureSection>
[[Category: protein structure initiative]]
[[Category: Archaeoglobus fulgidus DSM 4304]]
[[Category: psi]]
[[Category: Large Structures]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 14:47:59 2008''

Latest revision as of 04:58, 17 October 2024

CRYSTAL STRUCTURE OF an alpha/beta domain of a putative pyruvate kinase (AF0103) FROM ARCHAEOGLOBUS FULGIDUS DSM 4304 AT 1.30 A RESOLUTION

1vp8, resolution 1.30Å

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