4j3k: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
==Structure of the N-terminal domian of human coronavirus OC43 nucleocapsid protein==
==Structure of the N-terminal domian of human coronavirus OC43 nucleocapsid protein==
<StructureSection load='4j3k' size='340' side='right' caption='[[4j3k]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='4j3k' size='340' side='right'caption='[[4j3k]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4j3k]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human_coronavirus_oc43 Human coronavirus oc43]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4J3K OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4J3K FirstGlance]. <br>
<table><tr><td colspan='2'>[[4j3k]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_coronavirus_OC43 Human coronavirus OC43]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4J3K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4J3K FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4j3k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4j3k OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4j3k RCSB], [http://www.ebi.ac.uk/pdbsum/4j3k PDBsum]</span></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4j3k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4j3k OCA], [https://pdbe.org/4j3k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4j3k RCSB], [https://www.ebi.ac.uk/pdbsum/4j3k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4j3k ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/Q6SA23_CVHOC Q6SA23_CVHOC]] Major structural component of virions that associates with genomic RNA to form a long, flexible, helical nucleocapsid (By similarity).[PIRNR:PIRNR003888]  
[https://www.uniprot.org/uniprot/NCAP_CVHOC NCAP_CVHOC] Packages the positive strand viral genome RNA into a helical ribonucleocapsid (RNP) and plays a fundamental role during virion assembly through its interactions with the viral genome and membrane protein M. Plays an important role in enhancing the efficiency of subgenomic viral RNA transcription as well as viral replication.[HAMAP-Rule:MF_04096]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 16: Line 18:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
<div class="pdbe-citations 4j3k" style="background-color:#fffaf0;"></div>


==See Also==
==See Also==
*[[Nucleoprotein|Nucleoprotein]]
*[[Nucleoprotein 3D structures|Nucleoprotein 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Human coronavirus oc43]]
[[Category: Human coronavirus OC43]]
[[Category: Chen, I J]]
[[Category: Large Structures]]
[[Category: Hou, M H]]
[[Category: Chen IJ]]
[[Category: Lin, S Y]]
[[Category: Hou MH]]
[[Category: Five-stranded beta-sheet]]
[[Category: Lin SY]]
[[Category: Long extended loop]]
[[Category: Rna binding protein]]
[[Category: Rna-binding]]