1x8m: Difference between revisions

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[[Image:1x8m.gif|left|200px]]


{{Structure
==X-ray structure of pectin degrading enzyme 5-keto 4-deoxyuronate isomerase from Escherichia coli==
|PDB= 1x8m |SIZE=350|CAPTION= <scene name='initialview01'>1x8m</scene>, resolution 2.6&Aring;
<StructureSection load='1x8m' size='340' side='right'caption='[[1x8m]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND=  
<table><tr><td colspan='2'>[[1x8m]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1X8M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1X8M FirstGlance]. <br>
|ACTIVITY= [http://en.wikipedia.org/wiki/4-deoxy-L-threo-5-hexosulose-uronate_ketol-isomerase 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.1.17 5.3.1.17]  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
|GENE= kduI ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1x8m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1x8m OCA], [https://pdbe.org/1x8m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1x8m RCSB], [https://www.ebi.ac.uk/pdbsum/1x8m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1x8m ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/1x8m TOPSAN]</span></td></tr>
}}
</table>
 
== Function ==
'''X-ray structure of pectin degrading enzyme 5-keto 4-deoxyuronate isomerase from Escherichia coli'''
[https://www.uniprot.org/uniprot/KDUI_ECOLI KDUI_ECOLI] Catalyzes the isomerization of 5-dehydro-4-deoxy-D-glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate (By similarity).[HAMAP-Rule:MF_00687]
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
1X8M is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1X8M OCA].  
  <jmolCheckbox>
[[Category: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/x8/1x8m_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1x8m ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Almo, S C.]]
[[Category: Almo SC]]
[[Category: Burley, S K.]]
[[Category: Burley SK]]
[[Category: Fedorov, A A.]]
[[Category: Fedorov AA]]
[[Category: Fedorov, E V.]]
[[Category: Fedorov EV]]
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
[[Category: 5-keto 4-deoxyuronate isomerase]]
[[Category: new york structural genomix research consortium]]
[[Category: nysgxrc target t1827]]
[[Category: protein structure initiative]]
[[Category: psi]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 15:06:26 2008''
Retrieved from "https://proteopedia.org/1x8m"