1uil: Difference between revisions
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==Double-stranded RNA-binding motif of Hypothetical protein BAB28848== | ==Double-stranded RNA-binding motif of Hypothetical protein BAB28848== | ||
<StructureSection load='1uil' size='340' side='right' caption='[[1uil | <StructureSection load='1uil' size='340' side='right'caption='[[1uil]]' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[1uil]] is a 1 chain structure with sequence from [ | <table><tr><td colspan='2'>[[1uil]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UIL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UIL FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1uil FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1uil OCA], [https://pdbe.org/1uil PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1uil RCSB], [https://www.ebi.ac.uk/pdbsum/1uil PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1uil ProSAT], [https://www.topsan.org/Proteins/RSGI/1uil TOPSAN]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
[ | [https://www.uniprot.org/uniprot/DHX9_MOUSE DHX9_MOUSE] Component of the CRD-mediated complex that promotes MYC mRNA stability. Unwinds double-stranded DNA and RNA in a 3' to 5' direction. Alterations of secondary structure may subsequently influence interactions with proteins or other nucleic acids. Functions as a transcriptional activator. Involved with LARP6 in the stabilization of type I collagen mRNAs for CO1A1 and CO1A2 (By similarity). | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ui/1uil_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ui/1uil_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1uil ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | |||
[[Category: Mus musculus]] | [[Category: Mus musculus]] | ||
[[Category: Aoki | [[Category: Aoki M]] | ||
[[Category: Hamana | [[Category: Hamana H]] | ||
[[Category: Hayashi | [[Category: Hayashi F]] | ||
[[Category: Hayashizaki | [[Category: Hayashizaki Y]] | ||
[[Category: Hirota | [[Category: Hirota H]] | ||
[[Category: Inoue | [[Category: Inoue M]] | ||
[[Category: Kigawa | [[Category: Kigawa T]] | ||
[[Category: Kobayashi | [[Category: Kobayashi N]] | ||
[[Category: Matsuda | [[Category: Matsuda T]] | ||
[[Category: Matsuo | [[Category: Matsuo Y]] | ||
[[Category: Muto | [[Category: Muto Y]] | ||
[[Category: Nagata | [[Category: Nagata T]] | ||
[[Category: Osanai | [[Category: Osanai T]] | ||
[[Category: Seki E]] | |||
[[Category: Seki | [[Category: Shirouzu M]] | ||
[[Category: Shirouzu | [[Category: Tanaka A]] | ||
[[Category: Tanaka | [[Category: Terada T]] | ||
[[Category: Terada | [[Category: Yabuki T]] | ||
[[Category: Yabuki | [[Category: Yokoyama S]] | ||
[[Category: Yokoyama | [[Category: Yoshida M]] | ||
[[Category: Yoshida | |||
Latest revision as of 23:54, 27 December 2023
Double-stranded RNA-binding motif of Hypothetical protein BAB28848
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