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==NMR solution structure of protein VPA0419 from Vibrio parahaemolyticus. Northeast Structural Genomics target VpR68==
==NMR solution structure of protein VPA0419 from Vibrio parahaemolyticus. Northeast Structural Genomics target VpR68==
<StructureSection load='2jz5' size='340' side='right' caption='[[2jz5]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
<StructureSection load='2jz5' size='340' side='right'caption='[[2jz5]]' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2jz5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibrio_parahaemolyticus_rimd_2210633 Vibrio parahaemolyticus rimd 2210633]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JZ5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2JZ5 FirstGlance]. <br>
<table><tr><td colspan='2'>[[2jz5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_parahaemolyticus_RIMD_2210633 Vibrio parahaemolyticus RIMD 2210633]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JZ5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JZ5 FirstGlance]. <br>
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">VPA0419 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=223926 Vibrio parahaemolyticus RIMD 2210633])</td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2jz5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jz5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2jz5 RCSB], [http://www.ebi.ac.uk/pdbsum/2jz5 PDBsum], [http://www.topsan.org/Proteins/NESGC/2jz5 TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jz5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jz5 OCA], [https://pdbe.org/2jz5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jz5 RCSB], [https://www.ebi.ac.uk/pdbsum/2jz5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jz5 ProSAT], [https://www.topsan.org/Proteins/NESGC/2jz5 TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q87J34_VIBPA Q87J34_VIBPA]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jz/2jz5_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jz/2jz5_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2jz5 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Vibrio parahaemolyticus rimd 2210633]]
[[Category: Large Structures]]
[[Category: Acton, T]]
[[Category: Vibrio parahaemolyticus RIMD 2210633]]
[[Category: Baran, M C]]
[[Category: Acton T]]
[[Category: Eletski, A]]
[[Category: Baran MC]]
[[Category: Jiang, M]]
[[Category: Eletski A]]
[[Category: Liu, J]]
[[Category: Jiang M]]
[[Category: Maglaqui, M]]
[[Category: Liu J]]
[[Category: Montelione, G T]]
[[Category: Maglaqui M]]
[[Category: Structural genomic]]
[[Category: Montelione GT]]
[[Category: Parish, D]]
[[Category: Parish D]]
[[Category: Rost, B]]
[[Category: Rost B]]
[[Category: Singarapu, K K]]
[[Category: Singarapu KK]]
[[Category: Sukumaran, D K]]
[[Category: Sukumaran DK]]
[[Category: Swapna, G]]
[[Category: Swapna G]]
[[Category: Szyperski, T]]
[[Category: Szyperski T]]
[[Category: Xiao, R]]
[[Category: Xiao R]]
[[Category: Zhao, L]]
[[Category: Zhao L]]
[[Category: Gft nmr]]
[[Category: Nesg]]
[[Category: Protein structure]]
[[Category: PSI, Protein structure initiative]]
[[Category: Unknown function]]

Latest revision as of 09:43, 9 May 2024

NMR solution structure of protein VPA0419 from Vibrio parahaemolyticus. Northeast Structural Genomics target VpR68

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