3n7o: Difference between revisions
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==X-ray structure of human chymase in complex with small molecule inhibitor.== | ==X-ray structure of human chymase in complex with small molecule inhibitor.== | ||
<StructureSection load='3n7o' size='340' side='right' caption='[[3n7o]], [[Resolution|resolution]] 1.80Å' scene=''> | <StructureSection load='3n7o' size='340' side='right'caption='[[3n7o]], [[Resolution|resolution]] 1.80Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[3n7o]] is a 1 chain structure with sequence from [ | <table><tr><td colspan='2'>[[3n7o]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3N7O OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3N7O FirstGlance]. <br> | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=N7O:(S)-[(1S)-1-(5-CHLORO-1-BENZOTHIOPHEN-3-YL)-2-{[(E)-2-(3,4-DIFLUOROPHENYL)ETHENYL]AMINO}-2-OXOETHYL]METHYLPHOSPHINIC+ACID'>N7O | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr> | ||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=N7O:(S)-[(1S)-1-(5-CHLORO-1-BENZOTHIOPHEN-3-YL)-2-{[(E)-2-(3,4-DIFLUOROPHENYL)ETHENYL]AMINO}-2-OXOETHYL]METHYLPHOSPHINIC+ACID'>N7O</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3n7o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3n7o OCA], [https://pdbe.org/3n7o PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3n7o RCSB], [https://www.ebi.ac.uk/pdbsum/3n7o PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3n7o ProSAT]</span></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | |||
</table> | </table> | ||
== Function == | == Function == | ||
[ | [https://www.uniprot.org/uniprot/CMA1_HUMAN CMA1_HUMAN] Major secreted protease of mast cells with suspected roles in vasoactive peptide generation, extracellular matrix degradation, and regulation of gland secretion. | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/n7/3n7o_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/n7/3n7o_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3n7o ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
| Line 28: | Line 28: | ||
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
<div class="pdbe-citations 3n7o" style="background-color:#fffaf0;"></div> | |||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
[[Category: Abad | [[Category: Large Structures]] | ||
[[Category: Bayoumy | [[Category: Abad MC]] | ||
[[Category: Crysler | [[Category: Bayoumy S]] | ||
[[Category: Deckman | [[Category: Crysler C]] | ||
[[Category: Degaravilla | [[Category: Deckman I]] | ||
[[Category: Greco | [[Category: Degaravilla L]] | ||
[[Category: Kervinen | [[Category: Greco MN]] | ||
[[Category: Maryanoff | [[Category: Kervinen J]] | ||
[[Category: Spurlino | [[Category: Maryanoff BE]] | ||
[[Category: Spurlino J]] | |||
