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[[Image:2dsj.jpg|left|200px]]


{{Structure
==Crystal structure of project ID TT0128 from Thermus thermophilus HB8==
|PDB= 2dsj |SIZE=350|CAPTION= <scene name='initialview01'>2dsj</scene>, resolution 1.80&Aring;
<StructureSection load='2dsj' size='340' side='right'caption='[[2dsj]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=CL:CHLORIDE ION'>CL</scene>
<table><tr><td colspan='2'>[[2dsj]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DSJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DSJ FirstGlance]. <br>
|ACTIVITY= [http://en.wikipedia.org/wiki/Pyrimidine-nucleoside_phosphorylase Pyrimidine-nucleoside phosphorylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.2 2.4.2.2]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
|GENE=  
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
}}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dsj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dsj OCA], [https://pdbe.org/2dsj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dsj RCSB], [https://www.ebi.ac.uk/pdbsum/2dsj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dsj ProSAT], [https://www.topsan.org/Proteins/RSGI/2dsj TOPSAN]</span></td></tr>
 
</table>
'''Crystal structure of project ID TT0128 from Thermus thermophilus HB8'''
== Function ==
 
[https://www.uniprot.org/uniprot/Q5SHF9_THET8 Q5SHF9_THET8]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
2DSJ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DSJ OCA].  
Check<jmol>
[[Category: Pyrimidine-nucleoside phosphorylase]]
  <jmolCheckbox>
[[Category: Single protein]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ds/2dsj_consurf.spt"</scriptWhenChecked>
[[Category: Thermus thermophilus]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Shimizu, K.]]
  </jmolCheckbox>
[[Category: CL]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2dsj ConSurf].
[[Category: national project on protein structural and functional analyse]]
<div style="clear:both"></div>
[[Category: nppsfa]]
__TOC__
[[Category: pyrimidine-nucleoside phosphorylase]]
</StructureSection>
[[Category: riken structural genomics/proteomics initiative]]
[[Category: Large Structures]]
[[Category: rsgi]]
[[Category: Thermus thermophilus HB8]]
[[Category: structural genomic]]
[[Category: Shimizu K]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 16:30:57 2008''

Latest revision as of 08:29, 25 October 2023

Crystal structure of project ID TT0128 from Thermus thermophilus HB8

2dsj, resolution 1.80Å

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