2dum: Difference between revisions

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[[Image:2dum.jpg|left|200px]]


{{Structure
==Crystal structure of hypothetical protein, PH0823==
|PDB= 2dum |SIZE=350|CAPTION= <scene name='initialview01'>2dum</scene>, resolution 2.75&Aring;
<StructureSection load='2dum' size='340' side='right'caption='[[2dum]], [[Resolution|resolution]] 2.75&Aring;' scene=''>
|SITE=
== Structural highlights ==
|LIGAND=
<table><tr><td colspan='2'>[[2dum]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DUM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DUM FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.75&#8491;</td></tr>
|GENE=  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dum FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dum OCA], [https://pdbe.org/2dum PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dum RCSB], [https://www.ebi.ac.uk/pdbsum/2dum PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dum ProSAT], [https://www.topsan.org/Proteins/RSGI/2dum TOPSAN]</span></td></tr>
}}
</table>
 
== Function ==
'''Crystal structure of hypothetical protein, PH0823'''
[https://www.uniprot.org/uniprot/O58553_PYRHO O58553_PYRHO]  
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
2DUM is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DUM OCA].  
  <jmolCheckbox>
[[Category: Pyrococcus horikoshii]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/du/2dum_consurf.spt"</scriptWhenChecked>
[[Category: Single protein]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Hosaka, T.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Kishishita, S.]]
  </jmolCheckbox>
[[Category: Murayama, K.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2dum ConSurf].
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
<div style="clear:both"></div>
[[Category: Shirouzu, M.]]
__TOC__
[[Category: conserved hypothetical protein]]
</StructureSection>
[[Category: national project on protein structural and functional analyse]]
[[Category: Large Structures]]
[[Category: nppsfa]]
[[Category: Pyrococcus horikoshii OT3]]
[[Category: putative universal protein some]]
[[Category: Hosaka T]]
[[Category: riken structural genomics/proteomics initiative]]
[[Category: Kishishita S]]
[[Category: rsgi]]
[[Category: Murayama K]]
[[Category: structural genomic]]
[[Category: Shirouzu M]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 16:31:49 2008''

Latest revision as of 13:48, 13 March 2024

Crystal structure of hypothetical protein, PH0823

2dum, resolution 2.75Å

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