2v9z: Difference between revisions
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<StructureSection load='2v9z' size='340' side='right' caption='[[2v9z]], [[Resolution|resolution]] 3.00Å' scene=''> | ==Structure of the Rhodococcus haloalkane dehalogenase mutant with enhanced enantioselectivity== | ||
<StructureSection load='2v9z' size='340' side='right'caption='[[2v9z]], [[Resolution|resolution]] 3.00Å' scene=''> | |||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2v9z]] is a 1 chain structure with sequence from [ | <table><tr><td colspan='2'>[[2v9z]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodococcus_rhodochrous Rhodococcus rhodochrous]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V9Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2V9Z FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3Å</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2v9z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v9z OCA], [https://pdbe.org/2v9z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2v9z RCSB], [https://www.ebi.ac.uk/pdbsum/2v9z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2v9z ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
[ | [https://www.uniprot.org/uniprot/DHAA_RHORH DHAA_RHORH] Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons. Expresses halogenase activity against 1-chloroalkanes of chain length C3 to C10, and also shows a very weak activity with 1,2-dichloroethane. | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/v9/2v9z_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/v9/2v9z_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2v9z ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
*[[Dehalogenase|Dehalogenase]] | *[[Dehalogenase 3D structures|Dehalogenase 3D structures]] | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: Rhodococcus rhodochrous]] | [[Category: Rhodococcus rhodochrous]] | ||
[[Category: Chovancova | [[Category: Chovancova E]] | ||
[[Category: Damborsky | [[Category: Damborsky J]] | ||
[[Category: Emmer | [[Category: Emmer J]] | ||
[[Category: Jesenska | [[Category: Jesenska A]] | ||
[[Category: Koudelakova | [[Category: Koudelakova T]] | ||
[[Category: Lapkouski | [[Category: Kuta Smatanova I]] | ||
[[Category: Monincova | [[Category: Lapkouski M]] | ||
[[Category: Nagata | [[Category: Monincova M]] | ||
[[Category: Prokop | [[Category: Nagata Y]] | ||
[[Category: Sato | [[Category: Prokop Z]] | ||
[[Category: Senda | [[Category: Sato Y]] | ||
[[Category: Senda T]] | |||