2f29: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(13 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2f29.jpg|left|200px]]


{{Structure
==Crystal Structure of the Human Sialidase Neu2 Q116E Mutant in Complex with DANA Inhibitor==
|PDB= 2f29 |SIZE=350|CAPTION= <scene name='initialview01'>2f29</scene>, resolution 2.921&Aring;
<StructureSection load='2f29' size='340' side='right'caption='[[2f29]], [[Resolution|resolution]] 2.92&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=DAN:2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC+ACID'>DAN</scene> and <scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID'>EPE</scene>
<table><tr><td colspan='2'>[[2f29]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2F29 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2F29 FirstGlance]. <br>
|ACTIVITY= [http://en.wikipedia.org/wiki/Exo-alpha-sialidase Exo-alpha-sialidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.18 3.2.1.18]  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.921&#8491;</td></tr>
|GENE=  
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DAN:2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC+ACID'>DAN</scene>, <scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene></td></tr>
}}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2f29 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2f29 OCA], [https://pdbe.org/2f29 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2f29 RCSB], [https://www.ebi.ac.uk/pdbsum/2f29 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2f29 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/NEUR2_HUMAN NEUR2_HUMAN] Hydrolyzes sialylated compounds.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f2/2f29_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2f29 ConSurf].
<div style="clear:both"></div>


'''Crystal Structure of the Human Sialidase Neu2 Q116E Mutant in Complex with DANA Inhibitor'''
==See Also==
 
*[[Neuraminidase 3D structures|Neuraminidase 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
2F29 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2F29 OCA].
[[Category: Exo-alpha-sialidase]]
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Chavas, L M.G.]]
[[Category: Chavas LMG]]
[[Category: Fusi, P.]]
[[Category: Fusi P]]
[[Category: Kato, R.]]
[[Category: Kato R]]
[[Category: Monti, E.]]
[[Category: Monti E]]
[[Category: Tettamanti, G.]]
[[Category: Tettamanti G]]
[[Category: Tringali, C.]]
[[Category: Tringali C]]
[[Category: Venerando, B.]]
[[Category: Venerando B]]
[[Category: Wakatsuki, S.]]
[[Category: Wakatsuki S]]
[[Category: DAN]]
[[Category: EPE]]
[[Category: drug design]]
[[Category: ganglioside]]
[[Category: neuraminidase]]
[[Category: sialidase]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 16:47:13 2008''

Latest revision as of 08:44, 25 October 2023

Crystal Structure of the Human Sialidase Neu2 Q116E Mutant in Complex with DANA Inhibitor

2f29, resolution 2.92Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA