4bhl: Difference between revisions
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==Crystal structure of Litopenaeus vannamei arginine kinase in binary complex with arginine== | ==Crystal structure of Litopenaeus vannamei arginine kinase in binary complex with arginine== | ||
<StructureSection load='4bhl' size='340' side='right' caption='[[4bhl]], [[Resolution|resolution]] 1.90Å' scene=''> | <StructureSection load='4bhl' size='340' side='right'caption='[[4bhl]], [[Resolution|resolution]] 1.90Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[4bhl]] is a 1 chain structure with sequence from [ | <table><tr><td colspan='2'>[[4bhl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Penaeus_vannamei Penaeus vannamei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BHL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4BHL FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9Å</td></tr> | ||
<tr id=' | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ARG:ARGININE'>ARG</scene>, <scene name='pdbligand=BME:BETA-MERCAPTOETHANOL'>BME</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4bhl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4bhl OCA], [https://pdbe.org/4bhl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4bhl RCSB], [https://www.ebi.ac.uk/pdbsum/4bhl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4bhl ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/KARG0_PENVA KARG0_PENVA] Catalyzes the reversible transfer of high energy ATP gamma-phosphate group to L-arginine (PubMed:17496423, PubMed:27072556, PubMed:22750864, PubMed:23873077). Has nucleoside diphosphate kinase-like activity toward dTDP. Binds and phosphorylates dTDP using ATP as a phosphate donor. Does not phosphorylate dADP, dCDP, dGDP, dTMP or thymidine (PubMed:27072556).<ref>PMID:17496423</ref> <ref>PMID:22750864</ref> <ref>PMID:23873077</ref> <ref>PMID:27072556</ref> | |||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
<div class="pdbe-citations 4bhl" style="background-color:#fffaf0;"></div> | |||
==See Also== | |||
*[[Arginine kinase 3D structures|Arginine kinase 3D structures]] | |||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: | [[Category: Penaeus vannamei]] | ||
[[Category: Brieba | [[Category: Brieba LG]] | ||
[[Category: Carrasco-Miranda | [[Category: Carrasco-Miranda JS]] | ||
[[Category: Criscitiello | [[Category: Criscitiello MF]] | ||
[[Category: Garcia-Orozco | [[Category: Garcia-Orozco KD]] | ||
[[Category: Hernandez-Flores | [[Category: Hernandez-Flores JM]] | ||
[[Category: Lopez-Zavala | [[Category: Lopez-Zavala AA]] | ||
[[Category: Rudino-Pinera | [[Category: Rudino-Pinera E]] | ||
[[Category: Sotelo-Mundo | [[Category: Sotelo-Mundo RR]] | ||
[[Category: Sugich-Miranda | [[Category: Sugich-Miranda R]] | ||
[[Category: Velazquez-Contreras | [[Category: Velazquez-Contreras EF]] | ||