4l6d: Difference between revisions

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==Crystal structure of 5-carboxyvanillate decarboxylase from Sphingomonas paucimobilis complexed with vanillic acid==
==Crystal structure of 5-carboxyvanillate decarboxylase from Sphingomonas paucimobilis complexed with vanillic acid==
<StructureSection load='4l6d' size='340' side='right' caption='[[4l6d]], [[Resolution|resolution]] 1.45&Aring;' scene=''>
<StructureSection load='4l6d' size='340' side='right'caption='[[4l6d]], [[Resolution|resolution]] 1.45&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4l6d]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_devorans"_zimmermann_1890 "bacillus devorans" zimmermann 1890]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4L6D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4L6D FirstGlance]. <br>
<table><tr><td colspan='2'>[[4l6d]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Sphingomonas_paucimobilis Sphingomonas paucimobilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4L6D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4L6D FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=VNL:4-HYDROXY-3-METHOXYBENZOATE'>VNL</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.449&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4icm|4icm]], [[4l86|4l86]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=VNL:4-HYDROXY-3-METHOXYBENZOATE'>VNL</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ligW ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=13689 "Bacillus devorans" Zimmermann 1890])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4l6d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4l6d OCA], [https://pdbe.org/4l6d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4l6d RCSB], [https://www.ebi.ac.uk/pdbsum/4l6d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4l6d ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4l6d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4l6d OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4l6d RCSB], [http://www.ebi.ac.uk/pdbsum/4l6d PDBsum]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q8RJ47_SPHPI Q8RJ47_SPHPI]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Bacillus devorans zimmermann 1890]]
[[Category: Large Structures]]
[[Category: Almo, S C]]
[[Category: Sphingomonas paucimobilis]]
[[Category: Fedorov, A A]]
[[Category: Almo SC]]
[[Category: Fedorov, E V]]
[[Category: Fedorov AA]]
[[Category: Raushel, F M]]
[[Category: Fedorov EV]]
[[Category: Vladimirova, A]]
[[Category: Raushel FM]]
[[Category: Amidohydrolase fold]]
[[Category: Vladimirova A]]
[[Category: Hydrolase]]
[[Category: Vanillic acid]]
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