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[[Image:2i3d.gif|left|200px]]


{{Structure
==Crystal Structure of Protein of Unknown Function ATU1826, a Putative Alpha/Beta Hydrolase from Agrobacterium tumefaciens==
|PDB= 2i3d |SIZE=350|CAPTION= <scene name='initialview01'>2i3d</scene>, resolution 1.50&Aring;
<StructureSection load='2i3d' size='340' side='right'caption='[[2i3d]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene> and <scene name='pdbligand=CL:CHLORIDE ION'>CL</scene>
<table><tr><td colspan='2'>[[2i3d]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I3D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2I3D FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
|GENE= Atu1826 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=358 Agrobacterium tumefaciens])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
}}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2i3d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2i3d OCA], [https://pdbe.org/2i3d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2i3d RCSB], [https://www.ebi.ac.uk/pdbsum/2i3d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2i3d ProSAT], [https://www.topsan.org/Proteins/MCSG/2i3d TOPSAN]</span></td></tr>
 
</table>
'''Crystal Structure of Protein of Unknown Function ATU1826, a Putative Alpha/Beta Hydrolase from Agrobacterium tumefaciens'''
== Function ==
 
[https://www.uniprot.org/uniprot/A9CIK7_AGRFC A9CIK7_AGRFC]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
2I3D is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens Agrobacterium tumefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I3D OCA].  
Check<jmol>
[[Category: Agrobacterium tumefaciens]]
  <jmolCheckbox>
[[Category: Single protein]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i3/2i3d_consurf.spt"</scriptWhenChecked>
[[Category: Edwards, A.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Joachimiak, A.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
  </jmolCheckbox>
[[Category: Osipiuk, J.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2i3d ConSurf].
[[Category: Savchenko, A.]]
<div style="clear:both"></div>
[[Category: Xu, X.]]
__TOC__
[[Category: Zheng, H.]]
</StructureSection>
[[Category: CL]]
[[Category: Agrobacterium fabrum str. C58]]
[[Category: MG]]
[[Category: Large Structures]]
[[Category: apc5865]]
[[Category: Edwards A]]
[[Category: hydrolase]]
[[Category: Joachimiak A]]
[[Category: mcsg]]
[[Category: Osipiuk J]]
[[Category: midwest center for structural genomic]]
[[Category: Savchenko A]]
[[Category: protein structure initiative]]
[[Category: Xu X]]
[[Category: psi-2]]
[[Category: Zheng H]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 17:24:58 2008''

Latest revision as of 08:10, 30 October 2024

Crystal Structure of Protein of Unknown Function ATU1826, a Putative Alpha/Beta Hydrolase from Agrobacterium tumefaciens

2i3d, resolution 1.50Å

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