4s0f: Difference between revisions
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New page: '''Unreleased structure''' The entry 4s0f is ON HOLD Authors: Lin, D.L., Huang, S., Chen, J. Description: Crystal structure of the peptidase-containing ABC transporter PCAT1 E648Q muta... |
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==Crystal structure of the peptidase-containing ABC transporter PCAT1 E648Q mutant complexed with ATPgS in an occluded conformation== | |||
<StructureSection load='4s0f' size='340' side='right'caption='[[4s0f]], [[Resolution|resolution]] 5.51Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[4s0f]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Acetivibrio_thermocellus_ATCC_27405 Acetivibrio thermocellus ATCC 27405]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4S0F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4S0F FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 5.515Å</td></tr> | |||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AGS:PHOSPHOTHIOPHOSPHORIC+ACID-ADENYLATE+ESTER'>AGS</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4s0f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4s0f OCA], [https://pdbe.org/4s0f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4s0f RCSB], [https://www.ebi.ac.uk/pdbsum/4s0f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4s0f ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/A3DCU1_ACET2 A3DCU1_ACET2] | |||
<div style="background-color:#fffaf0;"> | |||
== Publication Abstract from PubMed == | |||
Bacteria secrete peptides and proteins to communicate, to poison competitors, and to manipulate host cells. Among the various protein-translocation machineries, the peptidase-containing ATP-binding cassette transporters (PCATs) are appealingly simple. Each PCAT contains two peptidase domains that cleave the secretion signal from the substrate, two transmembrane domains that form a translocation pathway, and two nucleotide-binding domains that hydrolyse ATP. In Gram-positive bacteria, PCATs function both as maturation proteases and exporters for quorum-sensing or antimicrobial polypeptides. In Gram-negative bacteria, PCATs interact with two other membrane proteins to form the type 1 secretion system. Here we present crystal structures of PCAT1 from Clostridium thermocellum in two different conformations. These structures, accompanied by biochemical data, show that the translocation pathway is a large alpha-helical barrel sufficient to accommodate small folded proteins. ATP binding alternates access to the transmembrane pathway and also regulates the protease activity, thereby coupling substrate processing to translocation. | |||
Crystal structures of a polypeptide processing and secretion transporter.,Lin DY, Huang S, Chen J Nature. 2015 Jul 23;523(7561):425-30. doi: 10.1038/nature14623. PMID:26201595<ref>PMID:26201595</ref> | |||
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |||
[[Category: | </div> | ||
[[Category: | <div class="pdbe-citations 4s0f" style="background-color:#fffaf0;"></div> | ||
[[Category: | == References == | ||
[[Category: | <references/> | ||
__TOC__ | |||
</StructureSection> | |||
[[Category: Acetivibrio thermocellus ATCC 27405]] | |||
[[Category: Large Structures]] | |||
[[Category: Chen J]] | |||
[[Category: Huang S]] | |||
[[Category: Lin DL]] | |||
Latest revision as of 18:00, 20 September 2023
Crystal structure of the peptidase-containing ABC transporter PCAT1 E648Q mutant complexed with ATPgS in an occluded conformation
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