2w5e: Difference between revisions
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== | |||
<StructureSection load='2w5e' size='340' side='right' caption='[[2w5e]], [[Resolution|resolution]] 2.00Å' scene=''> | ==Structural and biochemical analysis of human pathogenic astrovirus serine protease at 2.0 Angstrom resolution== | ||
<StructureSection load='2w5e' size='340' side='right'caption='[[2w5e]], [[Resolution|resolution]] 2.00Å' scene=''> | |||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2w5e]] is a 6 chain structure with sequence from [ | <table><tr><td colspan='2'>[[2w5e]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_astrovirus_1 Human astrovirus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W5E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2W5E FirstGlance]. <br> | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr> | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2w5e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2w5e OCA], [https://pdbe.org/2w5e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2w5e RCSB], [https://www.ebi.ac.uk/pdbsum/2w5e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2w5e ProSAT]</span></td></tr> | |||
</table> | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/Q3ZN04_HASV1 Q3ZN04_HASV1] Protein covalently attached to the 5' extremity of the genomic and subgenomic RNAs.[ARBA:ARBA00029406] | |||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/w5/2w5e_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/w5/2w5e_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2w5e ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
<div class="pdbe-citations 2w5e" style="background-color:#fffaf0;"></div> | |||
== References == | == References == | ||
<references/> | <references/> | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Human astrovirus 1]] | [[Category: Human astrovirus 1]] | ||
[[Category: Barthel | [[Category: Large Structures]] | ||
[[Category: Bonivento | [[Category: Barthel J]] | ||
[[Category: Canard | [[Category: Bonivento D]] | ||
[[Category: Coutard | [[Category: Canard B]] | ||
[[Category: Mattevi | [[Category: Coutard B]] | ||
[[Category: Nenci | [[Category: Mattevi A]] | ||
[[Category: Robel | [[Category: Nenci S]] | ||
[[Category: Rohayem | [[Category: Robel I]] | ||
[[Category: Speroni | [[Category: Rohayem J]] | ||
[[Category: Speroni S]] | |||
Latest revision as of 10:08, 9 May 2024
Structural and biochemical analysis of human pathogenic astrovirus serine protease at 2.0 Angstrom resolution
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