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==NMR and MD solution structure of a Gamma-Methylated PNA duplex==
==NMR and MD solution structure of a Gamma-Methylated PNA duplex==
<StructureSection load='2kvj' size='340' side='right' caption='[[2kvj]], [[NMR_Ensembles_of_Models | 11 NMR models]]' scene=''>
<StructureSection load='2kvj' size='340' side='right'caption='[[2kvj]]' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2kvj]] is a 2 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KVJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2KVJ FirstGlance]. <br>
<table><tr><td colspan='2'>[[2kvj]] is a 2 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KVJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KVJ FirstGlance]. <br>
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=40A:N-[(2S)-2-AMINOPROPYL]-N-[(6-AMINO-9H-PURIN-9-YL)ACETYL]GLYCINE'>40A</scene>, <scene name='pdbligand=40C:N-[(4-AMINO-2-OXOPYRIMIDIN-1(2H)-YL)ACETYL]-N-[(2S)-2-AMINOPROPYL]GLYCINE'>40C</scene>, <scene name='pdbligand=40G:N-[(2-AMINO-6-OXO-1,6-DIHYDRO-9H-PURIN-9-YL)ACETYL]-N-[(2S)-2-AMINOPROPYL]GLYCINE'>40G</scene>, <scene name='pdbligand=40T:N-[(2S)-2-AMINOPROPYL]-N-[(5-METHYL-2,4-DIOXO-3,4-DIHYDROPYRIMIDIN-1(2H)-YL)ACETYL]GLYCINE'>40T</scene>, <scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=NME:METHYLAMINE'>NME</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2k4g|2k4g]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=40A:N-[(2S)-2-AMINOPROPYL]-N-[(6-AMINO-9H-PURIN-9-YL)ACETYL]GLYCINE'>40A</scene>, <scene name='pdbligand=40C:N-[(4-AMINO-2-OXOPYRIMIDIN-1(2H)-YL)ACETYL]-N-[(2S)-2-AMINOPROPYL]GLYCINE'>40C</scene>, <scene name='pdbligand=40G:N-[(2-AMINO-6-OXO-1,6-DIHYDRO-9H-PURIN-9-YL)ACETYL]-N-[(2S)-2-AMINOPROPYL]GLYCINE'>40G</scene>, <scene name='pdbligand=40T:N-[(2S)-2-AMINOPROPYL]-N-[(5-METHYL-2,4-DIOXO-3,4-DIHYDROPYRIMIDIN-1(2H)-YL)ACETYL]GLYCINE'>40T</scene>, <scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=NME:METHYLAMINE'>NME</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2kvj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kvj OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2kvj RCSB], [http://www.ebi.ac.uk/pdbsum/2kvj PDBsum]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kvj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kvj OCA], [https://pdbe.org/2kvj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kvj RCSB], [https://www.ebi.ac.uk/pdbsum/2kvj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kvj ProSAT]</span></td></tr>
</table>
</table>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
<div class="pdbe-citations 2kvj" style="background-color:#fffaf0;"></div>
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Achim, C]]
[[Category: Large Structures]]
[[Category: Crawford, M J]]
[[Category: Achim C]]
[[Category: Gil, R R]]
[[Category: Crawford MJ]]
[[Category: He, W]]
[[Category: Gil RR]]
[[Category: Ly, D H]]
[[Category: He W]]
[[Category: Madrid, M]]
[[Category: Ly DH]]
[[Category: Rapireddy, S]]
[[Category: Madrid M]]
[[Category: Gamma-methylated pna]]
[[Category: Rapireddy S]]
[[Category: Methyl modified pna]]
[[Category: Peptide nucleic acid]]
[[Category: Pna]]
Retrieved from "https://proteopedia.org/2kvj"