2pig: Difference between revisions

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[[Image:2pig.gif|left|200px]]


{{Structure
==Crystal structure of ydcK from Salmonella cholerae at 2.38 A resolution. Northeast Structural Genomics target SCR6==
|PDB= 2pig |SIZE=350|CAPTION= <scene name='initialview01'>2pig</scene>, resolution 2.380&Aring;
<StructureSection load='2pig' size='340' side='right'caption='[[2pig]], [[Resolution|resolution]] 2.38&Aring;' scene=''>
|SITE=
== Structural highlights ==
|LIGAND= <scene name='pdbligand=ZN:ZINC ION'>ZN</scene>
<table><tr><td colspan='2'>[[2pig]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A Salmonella enterica subsp. enterica serovar Paratyphi A]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PIG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PIG FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.38&#8491;</td></tr>
|GENE= ydcK, SPA1259 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=54388 Salmonella paratyphi])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
}}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pig FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pig OCA], [https://pdbe.org/2pig PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pig RCSB], [https://www.ebi.ac.uk/pdbsum/2pig PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pig ProSAT], [https://www.topsan.org/Proteins/NESGC/2pig TOPSAN]</span></td></tr>
 
</table>
'''Crystal structure of ydcK from Salmonella cholerae at 2.38 A resolution. Northeast Structural Genomics target SCR6'''
== Function ==
 
[https://www.uniprot.org/uniprot/A0A0H2WQ05_SALPA A0A0H2WQ05_SALPA]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
2PIG is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Salmonella_paratyphi Salmonella paratyphi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PIG OCA].  
Check<jmol>
[[Category: Salmonella paratyphi]]
  <jmolCheckbox>
[[Category: Single protein]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pi/2pig_consurf.spt"</scriptWhenChecked>
[[Category: Acton, T B.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Benach, J.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Chen, Y.]]
  </jmolCheckbox>
[[Category: Conover, K.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pig ConSurf].
[[Category: Ho, C K.]]
<div style="clear:both"></div>
[[Category: Hunt, J F.]]
__TOC__
[[Category: Janjua, H.]]
</StructureSection>
[[Category: Ma, L-C.]]
[[Category: Large Structures]]
[[Category: Montelione, G T.]]
[[Category: Salmonella enterica subsp. enterica serovar Paratyphi A]]
[[Category: NESG, Northeast Structural Genomics Consortium.]]
[[Category: Acton TB]]
[[Category: Seetharaman, J.]]
[[Category: Benach J]]
[[Category: Tong, L.]]
[[Category: Chen Y]]
[[Category: Vorobiev, S M.]]
[[Category: Conover K]]
[[Category: Xiao, R.]]
[[Category: Ho CK]]
[[Category: ZN]]
[[Category: Hunt JF]]
[[Category: nesg]]
[[Category: Janjua H]]
[[Category: northeast structural genomics consortium]]
[[Category: Ma L-C]]
[[Category: protein structure initiative]]
[[Category: Montelione GT]]
[[Category: psi-2]]
[[Category: Seetharaman J]]
[[Category: scr6]]
[[Category: Tong L]]
[[Category: structural genomic]]
[[Category: Vorobiev SM]]
[[Category: ydck]]
[[Category: Xiao R]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:13:20 2008''

Latest revision as of 08:28, 30 October 2024

Crystal structure of ydcK from Salmonella cholerae at 2.38 A resolution. Northeast Structural Genomics target SCR6

2pig, resolution 2.38Å

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