2pkw: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(13 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2pkw.jpg|left|200px]]


{{Structure
==Crystal structure of UPF0341 protein yhiQ from Salmonella typhimurium, Northeast Structural Genomics Consortium Target StR221==
|PDB= 2pkw |SIZE=350|CAPTION= <scene name='initialview01'>2pkw</scene>, resolution 2.10&Aring;
<StructureSection load='2pkw' size='340' side='right'caption='[[2pkw]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene>
<table><tr><td colspan='2'>[[2pkw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PKW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PKW FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
|GENE= yhiQ, STM3593 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=602 Salmonella typhimurium])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
}}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pkw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pkw OCA], [https://pdbe.org/2pkw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pkw RCSB], [https://www.ebi.ac.uk/pdbsum/2pkw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pkw ProSAT], [https://www.topsan.org/Proteins/NESGC/2pkw TOPSAN]</span></td></tr>
 
</table>
'''Crystal structure of UPF0341 protein yhiQ from Salmonella typhimurium, Northeast Structural Genomics Consortium Target StR221'''
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
==About this Structure==
  <jmolCheckbox>
2PKW is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Salmonella_typhimurium Salmonella typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PKW OCA].  
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pk/2pkw_consurf.spt"</scriptWhenChecked>
[[Category: Salmonella typhimurium]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Single protein]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Acton, T B.]]
  </jmolCheckbox>
[[Category: Cunningham, K.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pkw ConSurf].
[[Category: Fang, Y.]]
<div style="clear:both"></div>
[[Category: Forouhar, F.]]
__TOC__
[[Category: Hunt, J F.]]
</StructureSection>
[[Category: Liu, J.]]
[[Category: Large Structures]]
[[Category: Ma, L-C.]]
[[Category: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]]
[[Category: Montelione, G T.]]
[[Category: Acton TB]]
[[Category: NESG, Northeast Structural Genomics Consortium.]]
[[Category: Cunningham K]]
[[Category: Owens, L.]]
[[Category: Fang Y]]
[[Category: Seetharaman, J.]]
[[Category: Forouhar F]]
[[Category: Su, M.]]
[[Category: Hunt JF]]
[[Category: Tong, L.]]
[[Category: Liu J]]
[[Category: Xiao, R.]]
[[Category: Ma L-C]]
[[Category: TRS]]
[[Category: Montelione GT]]
[[Category: alpha-beta protein]]
[[Category: Owens L]]
[[Category: nesg]]
[[Category: Seetharaman J]]
[[Category: northeast structural genomics consortium]]
[[Category: Su M]]
[[Category: protein structure initiative]]
[[Category: Tong L]]
[[Category: psi-2]]
[[Category: Xiao R]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:14:16 2008''

Latest revision as of 01:19, 21 November 2024

Crystal structure of UPF0341 protein yhiQ from Salmonella typhimurium, Northeast Structural Genomics Consortium Target StR221

2pkw, resolution 2.10Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA