2qib: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(11 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2qib.jpg|left|200px]]


{{Structure
==Crystal structure of tetR-family transcriptional regulator from Streptomyces coelicolor==
|PDB= 2qib |SIZE=350|CAPTION= <scene name='initialview01'>2qib</scene>, resolution 1.70&Aring;
<StructureSection load='2qib' size='340' side='right'caption='[[2qib]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=P6G:HEXAETHYLENE GLYCOL'>P6G</scene>
<table><tr><td colspan='2'>[[2qib]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Strco Strco]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QIB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QIB FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=P6G:HEXAETHYLENE+GLYCOL'>P6G</scene></td></tr>
|GENE= GI:21220695, SCO2223, SC10B7.18 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2 Bacteria])
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
}}
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GI:21220695, SCO2223, SC10B7.18 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=100226 STRCO])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qib FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qib OCA], [https://pdbe.org/2qib PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qib RCSB], [https://www.ebi.ac.uk/pdbsum/2qib PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qib ProSAT], [https://www.topsan.org/Proteins/MCSG/2qib TOPSAN]</span></td></tr>
</table>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qi/2qib_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qib ConSurf].
<div style="clear:both"></div>


'''Crystal structure of tetR-family transcriptional regulator from Streptomyces coelicolor'''
==See Also==
 
*[[Transcriptional activator 3D structures|Transcriptional activator 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
2QIB is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacteria Bacteria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QIB OCA].
[[Category: Large Structures]]
[[Category: Bacteria]]
[[Category: Strco]]
[[Category: Single protein]]
[[Category: Edwards, A]]
[[Category: Edwards, A.]]
[[Category: Joachimiak, A]]
[[Category: Joachimiak, A.]]
[[Category: Structural genomic]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Savchenko, A]]
[[Category: Savchenko, A.]]
[[Category: Xu, X]]
[[Category: Xu, X.]]
[[Category: Zhang, R]]
[[Category: Zhang, R.]]
[[Category: Zheng, H]]
[[Category: Zheng, H.]]
[[Category: Hth dna binding]]
[[Category: P6G]]
[[Category: Mcsg]]
[[Category: hth dna binding]]
[[Category: PSI, Protein structure initiative]]
[[Category: mcsg]]
[[Category: Tetr-family transcriptional regulator]]
[[Category: midwest center for structural genomic]]
[[Category: Transcription]]
[[Category: protein structure initiative]]
[[Category: psi-2]]
[[Category: structural genomic]]
[[Category: tetr-family transcriptional regulator]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:26:06 2008''