2qkp: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(14 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2qkp.gif|left|200px]]


{{Structure
==Crystal structure of C-terminal domain of SMU_1151c from Streptococcus mutans==
|PDB= 2qkp |SIZE=350|CAPTION= <scene name='initialview01'>2qkp</scene>, resolution 1.750&Aring;
<StructureSection load='2qkp' size='340' side='right'caption='[[2qkp]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene> and <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>
<table><tr><td colspan='2'>[[2qkp]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_mutans_UA159 Streptococcus mutans UA159]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QKP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QKP FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
|GENE= SMU_1151c ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1309 Streptococcus mutans])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
}}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qkp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qkp OCA], [https://pdbe.org/2qkp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qkp RCSB], [https://www.ebi.ac.uk/pdbsum/2qkp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qkp ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2qkp TOPSAN]</span></td></tr>
 
</table>
'''Crystal structure of C-terminal domain of SMU_1151c from Streptococcus mutans'''
== Function ==
 
[https://www.uniprot.org/uniprot/Q8DU08_STRMU Q8DU08_STRMU]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
2QKP is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Streptococcus_mutans Streptococcus mutans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QKP OCA].  
Check<jmol>
[[Category: Single protein]]
  <jmolCheckbox>
[[Category: Streptococcus mutans]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qk/2qkp_consurf.spt"</scriptWhenChecked>
[[Category: Almo, S C.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Bain, K.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Burley, S K.]]
  </jmolCheckbox>
[[Category: Gheyi, T.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qkp ConSurf].
[[Category: Gilmore, M.]]
<div style="clear:both"></div>
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
__TOC__
[[Category: Ramagopal, U A.]]
</StructureSection>
[[Category: Sauder, J M.]]
[[Category: Large Structures]]
[[Category: Toro, R.]]
[[Category: Streptococcus mutans UA159]]
[[Category: Wu, B.]]
[[Category: Almo SC]]
[[Category: EDO]]
[[Category: Bain K]]
[[Category: GOL]]
[[Category: Burley SK]]
[[Category: new york structural genomix research consortium]]
[[Category: Gheyi T]]
[[Category: nysgxrc]]
[[Category: Gilmore M]]
[[Category: protein structure initiative]]
[[Category: Ramagopal UA]]
[[Category: psi-2]]
[[Category: Sauder JM]]
[[Category: structural genomic]]
[[Category: Toro R]]
[[Category: unknown function]]
[[Category: Wu B]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:26:47 2008''

Latest revision as of 09:16, 21 February 2024

Crystal structure of C-terminal domain of SMU_1151c from Streptococcus mutans

2qkp, resolution 1.75Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA