4d2g: Difference between revisions

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==Crystal structure of human PCNA in complex with p15 peptide==
==Crystal structure of human PCNA in complex with p15 peptide==
<StructureSection load='4d2g' size='340' side='right' caption='[[4d2g]], [[Resolution|resolution]] 2.65&Aring;' scene=''>
<StructureSection load='4d2g' size='340' side='right'caption='[[4d2g]], [[Resolution|resolution]] 2.65&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4d2g]] is a 5 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4D2G OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4D2G FirstGlance]. <br>
<table><tr><td colspan='2'>[[4d2g]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4D2G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4D2G FirstGlance]. <br>
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4d2g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4d2g OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4d2g RCSB], [http://www.ebi.ac.uk/pdbsum/4d2g PDBsum]</span></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.65&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4d2g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4d2g OCA], [https://pdbe.org/4d2g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4d2g RCSB], [https://www.ebi.ac.uk/pdbsum/4d2g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4d2g ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/PCNA_HUMAN PCNA_HUMAN]] Auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand. Induces a robust stimulatory effect on the 3'-5' exonuclease and 3'-phosphodiesterase, but not apurinic-apyrimidinic (AP) endonuclease, APEX2 activities. Has to be loaded onto DNA in order to be able to stimulate APEX2. Plays a key role in DNA damage response (DDR) by being conveniently positioned at the replication fork to coordinate DNA replication with DNA repair and DNA damage tolerance pathways. Acts as a loading platform to recruit DDR proteins that allow completion of DNA replication after DNA damage and promote postreplication repair: Monoubiquitinated PCNA leads to recruitment of translesion (TLS) polymerases, while 'Lys-63'-linked polyubiquitination of PCNA is involved in error-free pathway and employs recombination mechanisms to synthesize across the lesion.<ref>PMID:19443450</ref> <ref>PMID:18719106</ref>
[https://www.uniprot.org/uniprot/PCNA_HUMAN PCNA_HUMAN] Auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand. Induces a robust stimulatory effect on the 3'-5' exonuclease and 3'-phosphodiesterase, but not apurinic-apyrimidinic (AP) endonuclease, APEX2 activities. Has to be loaded onto DNA in order to be able to stimulate APEX2. Plays a key role in DNA damage response (DDR) by being conveniently positioned at the replication fork to coordinate DNA replication with DNA repair and DNA damage tolerance pathways. Acts as a loading platform to recruit DDR proteins that allow completion of DNA replication after DNA damage and promote postreplication repair: Monoubiquitinated PCNA leads to recruitment of translesion (TLS) polymerases, while 'Lys-63'-linked polyubiquitination of PCNA is involved in error-free pathway and employs recombination mechanisms to synthesize across the lesion.<ref>PMID:19443450</ref> <ref>PMID:18719106</ref>  
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
<div class="pdbe-citations 4d2g" style="background-color:#fffaf0;"></div>
==See Also==
*[[Proliferating Cell Nuclear Antigen|Proliferating Cell Nuclear Antigen]]
*[[Proliferating cell nuclear antigen 3D structures|Proliferating cell nuclear antigen 3D structures]]
*[[User:Lukáš Cakl/Sandbox 1|User:Lukáš Cakl/Sandbox 1]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Bernardo, P]]
[[Category: Homo sapiens]]
[[Category: Blanco, F J]]
[[Category: Large Structures]]
[[Category: Castillo, F]]
[[Category: Synthetic construct]]
[[Category: Cordeiro, T N]]
[[Category: Bernardo P]]
[[Category: DeBiasio, A]]
[[Category: Blanco FJ]]
[[Category: Diercks, T]]
[[Category: Castillo F]]
[[Category: Ibanez, A]]
[[Category: Cordeiro TN]]
[[Category: Lelli, M]]
[[Category: DeBiasio A]]
[[Category: Luque, I]]
[[Category: Diercks T]]
[[Category: Merino, N]]
[[Category: Ibanez A]]
[[Category: Molina, R]]
[[Category: Lelli M]]
[[Category: Montoya, G]]
[[Category: Luque I]]
[[Category: Mortuza, G]]
[[Category: Merino N]]
[[Category: Villate, M]]
[[Category: Molina R]]
[[Category: Transcription]]
[[Category: Montoya G]]
[[Category: Mortuza G]]
[[Category: Villate M]]