2r50: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,330,058 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,330,058 edits
No edit summary
 
(13 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2r50.jpg|left|200px]]


{{Structure
==The crystal structure of nonsymbiotic corn hemoglobin 1==
|PDB= 2r50 |SIZE=350|CAPTION= <scene name='initialview01'>2r50</scene>, resolution 2.200&Aring;
<StructureSection load='2r50' size='340' side='right'caption='[[2r50]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene> and <scene name='pdbligand=ACY:ACETIC ACID'>ACY</scene>
<table><tr><td colspan='2'>[[2r50]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Zea_mays_subsp._parviglumis Zea mays subsp. parviglumis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2R50 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2R50 FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
|GENE= HB, GLB1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=76912 Zea mays subsp. parviglumis])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
}}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2r50 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2r50 OCA], [https://pdbe.org/2r50 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2r50 RCSB], [https://www.ebi.ac.uk/pdbsum/2r50 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2r50 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/HBL_ZEAMP HBL_ZEAMP] May not function as an oxygen storage or transport protein, but might act as an oxygen sensor or play a role in electron transfer, possibly to a bound oxygen molecule.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/r5/2r50_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2r50 ConSurf].
<div style="clear:both"></div>


'''The crystal structure of nonsymbiotic corn hemoglobin 1'''
==See Also==
 
*[[Hemoglobin 3D structures|Hemoglobin 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
2R50 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Zea_mays_subsp._parviglumis Zea mays subsp. parviglumis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2R50 OCA].
[[Category: Large Structures]]
[[Category: Single protein]]
[[Category: Zea mays subsp. parviglumis]]
[[Category: Zea mays subsp. parviglumis]]
[[Category: Hargrove, M S.]]
[[Category: Hargrove MS]]
[[Category: Hoy, J A.]]
[[Category: Hoy JA]]
[[Category: Smagghe, B J.]]
[[Category: Smagghe BJ]]
[[Category: ACY]]
[[Category: HEM]]
[[Category: SO4]]
[[Category: corn hemoglobin]]
[[Category: heme]]
[[Category: iron]]
[[Category: metal binding protein]]
[[Category: metal-binding]]
[[Category: nonsymbiotic hemoglobin]]
[[Category: plant hemoglobin]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:32:40 2008''
Retrieved from "https://proteopedia.org/2r50"