2ra8: Difference between revisions

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[[Image:2ra8.jpg|left|200px]]


{{Structure
==Crystal structure of the Q64V53_BACFR protein from Bacteroides fragilis. Northeast Structural Genomics Consortium target BfR43==
|PDB= 2ra8 |SIZE=350|CAPTION= <scene name='initialview01'>2ra8</scene>, resolution 1.95&Aring;
<StructureSection load='2ra8' size='340' side='right'caption='[[2ra8]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
|SITE=
== Structural highlights ==
|LIGAND=
<table><tr><td colspan='2'>[[2ra8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_fragilis_YCH46 Bacteroides fragilis YCH46]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RA8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RA8 FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
|GENE= BF1877 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=295405 Bacteroides fragilis YCH46])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CAS:S-(DIMETHYLARSENIC)CYSTEINE'>CAS</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
}}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ra8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ra8 OCA], [https://pdbe.org/2ra8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ra8 RCSB], [https://www.ebi.ac.uk/pdbsum/2ra8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ra8 ProSAT], [https://www.topsan.org/Proteins/NESGC/2ra8 TOPSAN]</span></td></tr>
 
</table>
'''Crystal structure of the Q64V53_BACFR protein from Bacteroides fragilis. Northeast Structural Genomics Consortium target BfR43'''
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
==About this Structure==
  <jmolCheckbox>
2RA8 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacteroides_fragilis_ych46 Bacteroides fragilis ych46]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RA8 OCA].  
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ra/2ra8_consurf.spt"</scriptWhenChecked>
[[Category: Bacteroides fragilis ych46]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Single protein]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Abashidze, M.]]
  </jmolCheckbox>
[[Category: Acton, T B.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ra8 ConSurf].
[[Category: Cunningham, K.]]
<div style="clear:both"></div>
[[Category: Hunt, J F.]]
__TOC__
[[Category: Maglaqui, M.]]
</StructureSection>
[[Category: Montelione, G T.]]
[[Category: Bacteroides fragilis YCH46]]
[[Category: NESG, Northeast Structural Genomics Consortium.]]
[[Category: Large Structures]]
[[Category: Owens, L.]]
[[Category: Abashidze M]]
[[Category: Seetharaman, J.]]
[[Category: Acton TB]]
[[Category: Tong, L.]]
[[Category: Cunningham K]]
[[Category: Vorobiev, S M.]]
[[Category: Hunt JF]]
[[Category: Wang, D.]]
[[Category: Maglaqui M]]
[[Category: Xiao, R.]]
[[Category: Montelione GT]]
[[Category: bfr43]]
[[Category: Owens L]]
[[Category: leucine rich repeat]]
[[Category: Seetharaman J]]
[[Category: lrr domain]]
[[Category: Tong L]]
[[Category: nesg]]
[[Category: Vorobiev SM]]
[[Category: northeast structural genomics consortium]]
[[Category: Wang D]]
[[Category: protein structure initiative]]
[[Category: Xiao R]]
[[Category: psi-2]]
[[Category: q64v53]]
[[Category: structural genomic]]
[[Category: unknown function]]
[[Category: wgr domain]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:34:02 2008''
Retrieved from "https://proteopedia.org/2ra8"