2rfl: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(12 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2rfl.jpg|left|200px]]


{{Structure
==Crystal structure of the putative phosphohistidine phosphatase SixA from Agrobacterium tumefaciens==
|PDB= 2rfl |SIZE=350|CAPTION= <scene name='initialview01'>2rfl</scene>, resolution 2.35&Aring;
<StructureSection load='2rfl' size='340' side='right'caption='[[2rfl]], [[Resolution|resolution]] 2.35&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=SCN:THIOCYANATE+ION'>SCN</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene> and <scene name='pdbligand=ACY:ACETIC ACID'>ACY</scene>
<table><tr><td colspan='2'>[[2rfl]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RFL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RFL FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.35&#8491;</td></tr>
|GENE= AGR_C_2511, Atu1358 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 Agrobacterium tumefaciens str. C58])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SCN:THIOCYANATE+ION'>SCN</scene></td></tr>
}}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2rfl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rfl OCA], [https://pdbe.org/2rfl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2rfl RCSB], [https://www.ebi.ac.uk/pdbsum/2rfl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2rfl ProSAT], [https://www.topsan.org/Proteins/MCSG/2rfl TOPSAN]</span></td></tr>
 
</table>
'''Crystal structure of the putative phosphohistidine phosphatase SixA from Agrobacterium tumefaciens'''
== Function ==
 
[https://www.uniprot.org/uniprot/A9CJ67_AGRFC A9CJ67_AGRFC]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
2RFL is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RFL OCA].
Check<jmol>
[[Category: Agrobacterium tumefaciens str. c58]]
  <jmolCheckbox>
[[Category: Single protein]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rf/2rfl_consurf.spt"</scriptWhenChecked>
[[Category: Binkowski, T.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Edwards, A M.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Joachimiak, A.]]
  </jmolCheckbox>
[[Category: Kim, Y.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2rfl ConSurf].
[[Category: MCSG, Midwest Center for Structural Genomics.]]
<div style="clear:both"></div>
[[Category: Savchenko, A.]]
__TOC__
[[Category: Xu, X.]]
</StructureSection>
[[Category: ACY]]
[[Category: Agrobacterium fabrum str. C58]]
[[Category: GOL]]
[[Category: Large Structures]]
[[Category: SCN]]
[[Category: Binkowski T]]
[[Category: alpha-beta-alpha sandwich]]
[[Category: Edwards AM]]
[[Category: hydrolase]]
[[Category: Joachimiak A]]
[[Category: isomerase]]
[[Category: Kim Y]]
[[Category: mcsg]]
[[Category: Savchenko A]]
[[Category: midwest center for structural genomic]]
[[Category: Xu X]]
[[Category: protein structure initiative]]
[[Category: psi-2]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:35:38 2008''

Latest revision as of 08:38, 30 October 2024

Crystal structure of the putative phosphohistidine phosphatase SixA from Agrobacterium tumefaciens

2rfl, resolution 2.35Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA