5a0w: Difference between revisions

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~~'''Unreleased structure'''~~

~~The entry~~ 5a0w is ~~ON HOLD until Paper Publication~~

==THE CRYSTAL STRUCTURE OF I-DMOI E117A IN COMPLEX WITH ITS TARGET DNA AND IN THE PRESENCE OF 2MM MN==

== Structural highlights ==

<table><tr><td colspan='2'>[[5a0w]] is a 9 chain structure with sequence from [https://en.wikipedia.org/wiki/Desulfurococcus_mucosus Desulfurococcus mucosus] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5A0W OCA]. For a guided tour on the structure components use [https://proteopedia.org/fgij/fg.htm?mol=5A0W FirstGlance].

</td></tr><tr id='method'><td class="sblockLbl">[[Empirical_models|Method:]]</td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2Å</td></tr>

<tr id='ligand'><td class="sblockLbl">[[Ligand|Ligands:]]</td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>

<tr id='resources'><td class="sblockLbl">Resources:</td><td class="sblockDat">[https://proteopedia.org/fgij/fg.htm?mol=5a0w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5a0w OCA], [https://pdbe.org/5a0w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5a0w RCSB], [https://www.ebi.ac.uk/pdbsum/5a0w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5a0w ProSAT]</td></tr>

</table>

== Function ==

[https://www.uniprot.org/uniprot/DMO1_DESMO DMO1_DESMO] Endonuclease involved in intron homing. Recognizes a recognizes up to 20 bp of DNA in the 23S rRNA gene intron. It has a slow turnover rate and cuts the coding strand with a slight preference over the non-coding strand.

~~Authors: Molina, R., Besker, N., Prieto, J., Montoya, G., D'Abramo, M.~~

==See Also==

*[[Endonuclease 3D structures|Endonuclease 3D structures]]

~~Description~~: ~~THE CRYSTAL STRUCTURE OF I-DMOI E117A IN COMPLEX WITH ITS TARGET DNA AND IN THE PRESENCE OF 2MM MN~~

__TOC__

[[Category: ~~Unreleased~~ Structures]]

</StructureSection>

[[Category: ~~D'Abramo, M~~]]

[[Category: Desulfurococcus mucosus]]

[[Category: ~~Molina, R~~]]

[[Category: Large Structures]]

[[Category: ~~Prieto, J~~]]

[[Category: Synthetic construct]]

[[Category: ~~Besker, N~~]]

[[Category: Besker N]]

[[Category: Montoya, G]]

[[Category: D'Abramo M]]

[[Category: Molina R]]

[[Category: Montoya G]]

[[Category: Prieto J]]

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@@ Line 1: / Line 1: @@
-'''Unreleased structure'''
-The entry 5a0w is ON HOLD  until Paper Publication
+==THE CRYSTAL STRUCTURE OF I-DMOI E117A IN COMPLEX WITH ITS TARGET DNA AND IN THE PRESENCE OF 2MM MN==
+<StructureSection load='5a0w' size='340' side='right'caption='[[5a0w]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
+== Structural highlights ==
+<table><tr><td colspan='2'>[[5a0w]] is a 9 chain structure with sequence from [https://en.wikipedia.org/wiki/Desulfurococcus_mucosus Desulfurococcus mucosus] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5A0W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5A0W FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5a0w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5a0w OCA], [https://pdbe.org/5a0w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5a0w RCSB], [https://www.ebi.ac.uk/pdbsum/5a0w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5a0w ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/DMO1_DESMO DMO1_DESMO] Endonuclease involved in intron homing. Recognizes a recognizes up to 20 bp of DNA in the 23S rRNA gene intron. It has a slow turnover rate and cuts the coding strand with a slight preference over the non-coding strand.
-Authors: Molina, R., Besker, N., Prieto, J., Montoya, G., D'Abramo, M.
+==See Also==
+*[[Endonuclease 3D structures|Endonuclease 3D structures]]
-Description: THE CRYSTAL STRUCTURE OF I-DMOI E117A IN COMPLEX WITH ITS TARGET DNA AND IN THE PRESENCE OF 2MM MN
+__TOC__
-[[Category: Unreleased Structures]]
+</StructureSection>
-[[Category: D'Abramo, M]]
+[[Category: Desulfurococcus mucosus]]
-[[Category: Molina, R]]
+[[Category: Large Structures]]
-[[Category: Prieto, J]]
+[[Category: Synthetic construct]]
-[[Category: Besker, N]]
+[[Category: Besker N]]
-[[Category: Montoya, G]]
+[[Category: D'Abramo M]]
+[[Category: Molina R]]
+[[Category: Montoya G]]
+[[Category: Prieto J]]