2ywj: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,613 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,613 edits
No edit summary
 
(11 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2ywj.jpg|left|200px]]


{{Structure
==Crystal structure of uncharacterized conserved protein from Methanocaldococcus jannaschii==
|PDB= 2ywj |SIZE=350|CAPTION= <scene name='initialview01'>2ywj</scene>, resolution 1.90&Aring;
<StructureSection load='2ywj' size='340' side='right'caption='[[2ywj]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND=
<table><tr><td colspan='2'>[[2ywj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii_DSM_2661 Methanocaldococcus jannaschii DSM 2661]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YWJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YWJ FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
|GENE=
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ywj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ywj OCA], [https://pdbe.org/2ywj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ywj RCSB], [https://www.ebi.ac.uk/pdbsum/2ywj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ywj ProSAT], [https://www.topsan.org/Proteins/RSGI/2ywj TOPSAN]</span></td></tr>
}}
</table>
 
== Function ==
'''Crystal structure of uncharacterized conserved protein from Methanocaldococcus jannaschii'''
[https://www.uniprot.org/uniprot/PDXT_METJA PDXT_METJA] Involved in the hydrolysis of glutamine to glutamate and ammonia. Channels an ammonia molecule to PdxS (By similarity).
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
2YWJ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YWJ OCA].  
  <jmolCheckbox>
[[Category: Methanocaldococcus jannaschii]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yw/2ywj_consurf.spt"</scriptWhenChecked>
[[Category: Single protein]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Ebihara, A.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Kuramitsu, S.]]
  </jmolCheckbox>
[[Category: Manzoku, M.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ywj ConSurf].
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
<div style="clear:both"></div>
[[Category: Yokoyama, S.]]
__TOC__
[[Category: national project on protein structural and functional analyse]]
</StructureSection>
[[Category: nppsfa]]
[[Category: Large Structures]]
[[Category: riken structural genomics/proteomics initiative]]
[[Category: Methanocaldococcus jannaschii DSM 2661]]
[[Category: rsgi]]
[[Category: Ebihara A]]
[[Category: structural genomic]]
[[Category: Kuramitsu S]]
[[Category: transferase]]
[[Category: Manzoku M]]
[[Category: uncharacterized conserved protein]]
[[Category: Yokoyama S]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:49:51 2008''
Retrieved from "https://proteopedia.org/2ywj"