2z6s: Difference between revisions

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[[Image:2z6s.jpg|left|200px]]


{{Structure
==Crystal structure of the oxy myoglobin free from X-ray-induced photoreduction==
|PDB= 2z6s |SIZE=350|CAPTION= <scene name='initialview01'>2z6s</scene>, resolution 1.25&Aring;
<StructureSection load='2z6s' size='340' side='right'caption='[[2z6s]], [[Resolution|resolution]] 1.25&Aring;' scene=''>
|SITE=
== Structural highlights ==
|LIGAND= <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene> and <scene name='pdbligand=OXY:OXYGEN MOLECULE'>OXY</scene>
<table><tr><td colspan='2'>[[2z6s]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Physeter_catodon Physeter catodon]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Z6S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2Z6S FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.25&#8491;</td></tr>
|GENE=  
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=OXY:OXYGEN+MOLECULE'>OXY</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
}}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2z6s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2z6s OCA], [https://pdbe.org/2z6s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2z6s RCSB], [https://www.ebi.ac.uk/pdbsum/2z6s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2z6s ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/MYG_PHYMC MYG_PHYMC] Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z6/2z6s_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2z6s ConSurf].
<div style="clear:both"></div>


'''Crystal structure of the oxy myoglobin free from X-ray-induced photoreduction'''
==See Also==
 
*[[Myoglobin 3D structures|Myoglobin 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
2Z6S is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Physeter_catodon Physeter catodon]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Z6S OCA].
[[Category: Large Structures]]
 
==Reference==
Structural characterization of the fleeting ferric peroxo species in myoglobin: experiment and theory., Unno M, Chen H, Kusama S, Shaik S, Ikeda-Saito M, J Am Chem Soc. 2007 Nov 7;129(44):13394-5. Epub 2007 Oct 12. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17929929 17929929]
[[Category: Physeter catodon]]
[[Category: Physeter catodon]]
[[Category: Single protein]]
[[Category: Chen H]]
[[Category: Chen, H.]]
[[Category: Ikeda-Saito M]]
[[Category: Ikeda-Saito, M.]]
[[Category: Kusama S]]
[[Category: Kusama, S.]]
[[Category: Shaik S]]
[[Category: Shaik, S.]]
[[Category: Unno M]]
[[Category: Unno, M.]]
[[Category: HEM]]
[[Category: OXY]]
[[Category: SO4]]
[[Category: heme]]
[[Category: iron]]
[[Category: metal-binding]]
[[Category: microspectrophotometer]]
[[Category: muscle protein]]
[[Category: oxygen binding]]
[[Category: oxygen transport]]
[[Category: x-ray-induced-photoreduction]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:52:38 2008''

Latest revision as of 08:38, 13 August 2026

Crystal structure of the oxy myoglobin free from X-ray-induced photoreduction

2z6s, resolution 1.25Å

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