3bf4: Difference between revisions

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[[Image:3bf4.jpg|left|200px]]


{{Structure
==Crystal structure of an ethd-like protein (reut_b5694) from ralstonia eutropha jmp134 at 2.10 A resolution==
|PDB= 3bf4 |SIZE=350|CAPTION= <scene name='initialview01'>3bf4</scene>, resolution 2.100&Aring;
<StructureSection load='3bf4' size='340' side='right'caption='[[3bf4]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene> and <scene name='pdbligand=IPA:ISOPROPYL ALCOHOL'>IPA</scene>
<table><tr><td colspan='2'>[[3bf4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Cupriavidus_pinatubonensis_JMP134 Cupriavidus pinatubonensis JMP134]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BF4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BF4 FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
|GENE= YP_299883.1, Reut_B5694 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=264198 Ralstonia eutropha JMP134])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=IPA:ISOPROPYL+ALCOHOL'>IPA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
}}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bf4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bf4 OCA], [https://pdbe.org/3bf4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bf4 RCSB], [https://www.ebi.ac.uk/pdbsum/3bf4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bf4 ProSAT], [https://www.topsan.org/Proteins/JCSG/3bf4 TOPSAN]</span></td></tr>
 
</table>
'''Crystal structure of EthD-like protein (YP_299883.1) from Ralstonia eutropha JMP134 at 2.10 A resolution'''
== Function ==
 
[https://www.uniprot.org/uniprot/Q46P95_CUPPJ Q46P95_CUPPJ]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3BF4 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Ralstonia_eutropha_jmp134 Ralstonia eutropha jmp134]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BF4 OCA].
Check<jmol>
[[Category: Ralstonia eutropha jmp134]]
  <jmolCheckbox>
[[Category: Single protein]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bf/3bf4_consurf.spt"</scriptWhenChecked>
[[Category: JCSG, Joint Center for Structural Genomics.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: EDO]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: IPA]]
  </jmolCheckbox>
[[Category: ethd-like protein]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bf4 ConSurf].
[[Category: jcsg]]
<div style="clear:both"></div>
[[Category: joint center for structural genomic]]
__TOC__
[[Category: protein structure initiative]]
</StructureSection>
[[Category: psi-2]]
[[Category: Cupriavidus pinatubonensis JMP134]]
[[Category: structural genomic]]
[[Category: Large Structures]]
[[Category: unknown function]]
[[Category: yp_299883 1]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:58:25 2008''
Retrieved from "https://proteopedia.org/3bf4"