5a40: Difference between revisions

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New page: '''Unreleased structure''' The entry 5a40 is ON HOLD Authors: Stockbridge, R.B., Kolmakova-Partensky, L., Shane, T., Koide, A., Koide, S., Miller, C., Newstead, S. Description: Crystal...
 
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'''Unreleased structure'''


The entry 5a40 is ON HOLD
==Crystal structure of a dual topology fluoride ion channel.==
<StructureSection load='5a40' size='340' side='right'caption='[[5a40]], [[Resolution|resolution]] 3.60&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[5a40]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Bordetella_pertussis Bordetella pertussis] and [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5A40 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5A40 FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.6&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5a40 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5a40 OCA], [https://pdbe.org/5a40 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5a40 RCSB], [https://www.ebi.ac.uk/pdbsum/5a40 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5a40 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/CRCB_BORPE CRCB_BORPE] Important for reducing fluoride concentration in the cell, thus reducing its toxicity.
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
To contend with hazards posed by environmental fluoride, microorganisms export this anion through F(-)-specific ion channels of the Fluc family. Since the recent discovery of Fluc channels, numerous idiosyncratic features of these proteins have been unearthed, including strong selectivity for F(-) over Cl(-) and dual-topology dimeric assembly. To understand the chemical basis for F(-) permeation and how the antiparallel subunits convene to form a F(-)-selective pore, here we solve the crystal structures of two bacterial Fluc homologues in complex with three different monobody inhibitors, with and without F(-) present, to a maximum resolution of 2.1 A. The structures reveal a surprising 'double-barrelled' channel architecture in which two F(-) ion pathways span the membrane, and the dual-topology arrangement includes a centrally coordinated cation, most likely Na(+). F(-) selectivity is proposed to arise from the very narrow pores and an unusual anion coordination that exploits the quadrupolar edges of conserved phenylalanine rings.


Authors: Stockbridge, R.B., Kolmakova-Partensky, L., Shane, T., Koide, A., Koide, S., Miller, C., Newstead, S.
Crystal structures of a double-barrelled fluoride ion channel.,Stockbridge RB, Kolmakova-Partensky L, Shane T, Koide A, Koide S, Miller C, Newstead S Nature. 2015 Sep 24;525(7570):548-51. doi: 10.1038/nature14981. Epub 2015 Sep 7. PMID:26344196<ref>PMID:26344196</ref>


Description: Crystal structure of a fluoride channel.
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
[[Category: Unreleased Structures]]
</div>
[[Category: Shane, T]]
<div class="pdbe-citations 5a40" style="background-color:#fffaf0;"></div>
[[Category: Kolmakova-Partensky, L]]
== References ==
[[Category: Koide, A]]
<references/>
[[Category: Koide, S]]
__TOC__
[[Category: Stockbridge, R.B]]
</StructureSection>
[[Category: Newstead, S]]
[[Category: Bordetella pertussis]]
[[Category: Miller, C]]
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Koide A]]
[[Category: Koide S]]
[[Category: Kolmakova-Partensky L]]
[[Category: Miller C]]
[[Category: Newstead S]]
[[Category: Shane T]]
[[Category: Stockbridge RB]]

Latest revision as of 11:36, 9 May 2024

Crystal structure of a dual topology fluoride ion channel.

5a40, resolution 3.60Å

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