5cfm: Difference between revisions

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New page: '''Unreleased structure''' The entry 5cfm is ON HOLD Authors: Kranzusch, P.J., Wilson, S.C., Lee, A.S.Y., Berger, J.M., Doudna, J.A., Vance, R.E. Description: [[Category: Unreleased S...
 
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'''Unreleased structure'''


The entry 5cfm is ON HOLD
==Crystal structure of anemone STING (Nematostella vectensis) in complex with 3', 3' cGAMP, c[G(3', 5')pA(3', 5')p]==
<StructureSection load='5cfm' size='340' side='right'caption='[[5cfm]], [[Resolution|resolution]] 1.99&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[5cfm]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Nematostella_vectensis Nematostella vectensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5CFM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5CFM FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.994&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=4BW:2-AMINO-9-[(2R,3R,3AS,5R,7AR,9R,10R,10AS,12R,14AR)-9-(6-AMINO-9H-PURIN-9-YL)-3,5,10,12-TETRAHYDROXY-5,12-DIOXIDOOCTAHYDRO-2H,7H-DIFURO[3,2-D 3,2-J][1,3,7,9,2,8]TETRAOXADIPHOSPHACYCLODODECIN-2-YL]-1,9-DIHYDRO-6H-PURIN-6-ONE'>4BW</scene>, <scene name='pdbligand=FLC:CITRATE+ANION'>FLC</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5cfm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5cfm OCA], [https://pdbe.org/5cfm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5cfm RCSB], [https://www.ebi.ac.uk/pdbsum/5cfm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5cfm ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/STING_NEMVE STING_NEMVE] Sensor of cytosolic DNA from bacteria and viruses that promotes autophagy (PubMed:30842662). Acts by recognizing and binding cyclic GMP-AMP (cGAMP), a messenger produced by CGAS in response to DNA in the cytosol (PubMed:26300263, PubMed:30842662). Following cGAMP-binding, promotes the formation of autophagosomes, leading to target cytosolic DNA for degradation by the lysosome (PubMed:30842662). Exhibits guanine base-specific ligand recognition. Binds 3'-3'linked cGAMP, 2'-3' linked cGAMP and 3'-3' linked c-di-GMP with much greater affinity as compared to 3'-3' linked c-di-AMP (PubMed:26300263). Lacks the C-terminal tail (CTT) found in mammalian orthologs which is essential for interferon signaling (PubMed:26300263).<ref>PMID:26300263</ref> <ref>PMID:30842662</ref>


Authors: Kranzusch, P.J., Wilson, S.C., Lee, A.S.Y., Berger, J.M., Doudna, J.A., Vance, R.E.
==See Also==
 
*[[Stimulator of interferon genes protein|Stimulator of interferon genes protein]]
Description:  
*[[Stimulator of interferon genes protein 3D structures|Stimulator of interferon genes protein 3D structures]]
[[Category: Unreleased Structures]]
== References ==
[[Category: Lee, A.S.Y]]
<references/>
[[Category: Kranzusch, P.J]]
__TOC__
[[Category: Vance, R.E]]
</StructureSection>
[[Category: Wilson, S.C]]
[[Category: Large Structures]]
[[Category: Berger, J.M]]
[[Category: Nematostella vectensis]]
[[Category: Doudna, J.A]]
[[Category: Berger JM]]
[[Category: Doudna JA]]
[[Category: Kranzusch PJ]]
[[Category: Lee ASY]]
[[Category: Vance RE]]
[[Category: Wilson SC]]
Retrieved from "https://proteopedia.org/5cfm"