5a7u: Difference between revisions

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New page: '''Unreleased structure''' The entry 5a7u is ON HOLD Authors: Nilsson, O.B., Hedman, R., Marino, J., Wickles, S., Bischoff, L., Johansson, M., Muller-Lucks, A., Trovato, F., Puglisi, J....
 
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'''Unreleased structure'''


The entry 5a7u is ON HOLD
==Single-particle cryo-EM of co-translational folded adr1 domain inside the E. coli ribosome exit tunnel.==
<SX load='5a7u' size='340' side='right' viewer='molstar' caption='[[5a7u]], [[Resolution|resolution]] 4.80&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[5a7u]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5A7U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5A7U FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 4.8&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5a7u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5a7u OCA], [https://pdbe.org/5a7u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5a7u RCSB], [https://www.ebi.ac.uk/pdbsum/5a7u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5a7u ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/ADR1_YEAST ADR1_YEAST] Required for transcriptional activation of glucose-repressible alcohol dehydrogenase (ADH2).
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
At what point during translation do proteins fold? It is well established that proteins can fold cotranslationally outside the ribosome exit tunnel, whereas studies of folding inside the exit tunnel have so far detected only the formation of helical secondary structure and collapsed or partially structured folding intermediates. Here, using a combination of cotranslational nascent chain force measurements, inter-subunit fluorescence resonance energy transfer studies on single translating ribosomes, molecular dynamics simulations, and cryoelectron microscopy, we show that a small zinc-finger domain protein can fold deep inside the vestibule of the ribosome exit tunnel. Thus, for small protein domains, the ribosome itself can provide the kind of sheltered folding environment that chaperones provide for larger proteins.


Authors: Nilsson, O.B., Hedman, R., Marino, J., Wickles, S., Bischoff, L., Johansson, M., Muller-Lucks, A., Trovato, F., Puglisi, J.D., O'Brien, E., Beckmann, R., von Heijne, G.
Cotranslational Protein Folding inside the Ribosome Exit Tunnel.,Nilsson OB, Hedman R, Marino J, Wickles S, Bischoff L, Johansson M, Muller-Lucks A, Trovato F, Puglisi JD, O'Brien EP, Beckmann R, von Heijne G Cell Rep. 2015 Sep 8;12(10):1533-40. doi: 10.1016/j.celrep.2015.07.065. Epub 2015, Aug 28. PMID:26321634<ref>PMID:26321634</ref>


Description: Single-particle cryo-EM of co-translational folded adr1 domain inside the E. coli ribosome exit tunnel.
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
[[Category: Unreleased Structures]]
</div>
[[Category: Puglisi, J.D]]
<div class="pdbe-citations 5a7u" style="background-color:#fffaf0;"></div>
[[Category: Marino, J]]
== References ==
[[Category: Beckmann, R]]
<references/>
[[Category: Nilsson, O.B]]
__TOC__
[[Category: Wickles, S]]
</SX>
[[Category: O'Brien, E]]
[[Category: Large Structures]]
[[Category: Muller-Lucks, A]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Bischoff, L]]
[[Category: Beckmann R]]
[[Category: Johansson, M]]
[[Category: Bischoff L]]
[[Category: Trovato, F]]
[[Category: Hedman R]]
[[Category: Hedman, R]]
[[Category: Johansson M]]
[[Category: Von Heijne, G]]
[[Category: Marino J]]
[[Category: Muller-Lucks A]]
[[Category: Nilsson OB]]
[[Category: O'Brien E]]
[[Category: Puglisi JD]]
[[Category: Trovato F]]
[[Category: Wickles S]]
[[Category: Von Heijne G]]

Latest revision as of 11:38, 9 May 2024

Single-particle cryo-EM of co-translational folded adr1 domain inside the E. coli ribosome exit tunnel.

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