2r63: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
==STRUCTURAL ROLE OF A BURIED SALT BRIDGE IN THE 434 REPRESSOR DNA-BINDING DOMAIN, NMR, 20 STRUCTURES==
==STRUCTURAL ROLE OF A BURIED SALT BRIDGE IN THE 434 REPRESSOR DNA-BINDING DOMAIN, NMR, 20 STRUCTURES==
<StructureSection load='2r63' size='340' side='right' caption='[[2r63]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
<StructureSection load='2r63' size='340' side='right'caption='[[2r63]]' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2r63]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bp434 Bp434]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2R63 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2R63 FirstGlance]. <br>
<table><tr><td colspan='2'>[[2r63]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Phage_434 Phage 434]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2R63 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2R63 FirstGlance]. <br>
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2r63 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2r63 OCA], [http://pdbe.org/2r63 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2r63 RCSB], [http://www.ebi.ac.uk/pdbsum/2r63 PDBsum]</span></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2r63 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2r63 OCA], [https://pdbe.org/2r63 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2r63 RCSB], [https://www.ebi.ac.uk/pdbsum/2r63 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2r63 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/RPC1_BP434 RPC1_BP434]] Binds to two sets of three contiguous operator sites in the phage genome.  
[https://www.uniprot.org/uniprot/RPC1_BP434 RPC1_BP434] Binds to two sets of three contiguous operator sites in the phage genome.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/r6/2r63_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/r6/2r63_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2r63 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 26: Line 28:
</div>
</div>
<div class="pdbe-citations 2r63" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 2r63" style="background-color:#fffaf0;"></div>
==See Also==
*[[Bacteriophage repressor|Bacteriophage repressor]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Bp434]]
[[Category: Large Structures]]
[[Category: Billeter, M]]
[[Category: Phage 434]]
[[Category: Pervushin, K V]]
[[Category: Billeter M]]
[[Category: Siegal, G]]
[[Category: Pervushin KV]]
[[Category: Wuthrich, K]]
[[Category: Siegal G]]
[[Category: Dna-binding domain]]
[[Category: Wuthrich K]]
[[Category: Gene regulating protein]]
[[Category: Helix-turn-helix]]
[[Category: Phage 434 repressor]]
Retrieved from "https://proteopedia.org/2r63"