2p17: Difference between revisions

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==Crystal structure of GK1651 from Geobacillus kaustophilus==
==Crystal structure of GK1651 from Geobacillus kaustophilus==
<StructureSection load='2p17' size='340' side='right' caption='[[2p17]], [[Resolution|resolution]] 1.52&Aring;' scene=''>
<StructureSection load='2p17' size='340' side='right'caption='[[2p17]], [[Resolution|resolution]] 1.52&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2p17]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Geoka Geoka]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P17 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2P17 FirstGlance]. <br>
<table><tr><td colspan='2'>[[2p17]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_kaustophilus_HTA426 Geobacillus kaustophilus HTA426]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P17 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P17 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.52&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1j1l|1j1l]]</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p17 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p17 OCA], [https://pdbe.org/2p17 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p17 RCSB], [https://www.ebi.ac.uk/pdbsum/2p17 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p17 ProSAT], [https://www.topsan.org/Proteins/RSGI/2p17 TOPSAN]</span></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GK1651 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=235909 GEOKA])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2p17 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p17 OCA], [http://pdbe.org/2p17 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2p17 RCSB], [http://www.ebi.ac.uk/pdbsum/2p17 PDBsum], [http://www.topsan.org/Proteins/RSGI/2p17 TOPSAN]</span></td></tr>
</table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
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Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p1/2p17_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p1/2p17_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p17 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Geoka]]
[[Category: Geobacillus kaustophilus HTA426]]
[[Category: Chen, L]]
[[Category: Large Structures]]
[[Category: Ebihara, A]]
[[Category: Chen L]]
[[Category: Fu, Z-Q]]
[[Category: Ebihara A]]
[[Category: II, J T.Swindell]]
[[Category: Fu Z-Q]]
[[Category: Kuramitsu, S]]
[[Category: Kuramitsu S]]
[[Category: Structural genomic]]
[[Category: Rose JP]]
[[Category: Rose, J P]]
[[Category: Shinkai A]]
[[Category: Shinkai, A]]
[[Category: Swindell II JT]]
[[Category: Wang, B C]]
[[Category: Wang BC]]
[[Category: Yokoyama, S]]
[[Category: Yokoyama S]]
[[Category: Zhu, J]]
[[Category: Zhu J]]
[[Category: Geobacillus kaustophilus]]
[[Category: Gk1651]]
[[Category: PSI, Protein structure initiative]]
[[Category: Rsgi]]
[[Category: Secsg]]
[[Category: Unknown function]]
Retrieved from "https://proteopedia.org/2p17"