1k3r: Difference between revisions

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[[Image:1k3r.gif|left|200px]]


{{Structure
==Crystal Structure of the Methyltransferase with a Knot from Methanobacterium thermoautotrophicum==
|PDB= 1k3r |SIZE=350|CAPTION= <scene name='initialview01'>1k3r</scene>, resolution 2.30&Aring;
<StructureSection load='1k3r' size='340' side='right'caption='[[1k3r]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND=  
<table><tr><td colspan='2'>[[1k3r]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanothermobacter_thermautotrophicus Methanothermobacter thermautotrophicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K3R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1K3R FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
|GENE=  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1k3r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1k3r OCA], [https://pdbe.org/1k3r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1k3r RCSB], [https://www.ebi.ac.uk/pdbsum/1k3r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1k3r ProSAT], [https://www.topsan.org/Proteins/MCSG/1k3r TOPSAN]</span></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG2106 COG2106]</span>
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1k3r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1k3r OCA], [http://www.ebi.ac.uk/pdbsum/1k3r PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=1k3r RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/O26109_METTH O26109_METTH]
 
== Evolutionary Conservation ==
'''Crystal Structure of the Methyltransferase with a Knot from Methanobacterium thermoautotrophicum'''
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
 
  <jmolCheckbox>
==About this Structure==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k3/1k3r_consurf.spt"</scriptWhenChecked>
1K3R is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Methanothermobacter_thermautotrophicus Methanothermobacter thermautotrophicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K3R OCA].  
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==Reference==
  </jmolCheckbox>
Deep trefoil knot implicated in RNA binding found in an archaebacterial protein., Zarembinski TI, Kim Y, Peterson K, Christendat D, Dharamsi A, Arrowsmith CH, Edwards AM, Joachimiak A, Proteins. 2003 Feb 1;50(2):177-83. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12486711 12486711]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1k3r ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Methanothermobacter thermautotrophicus]]
[[Category: Methanothermobacter thermautotrophicus]]
[[Category: Single protein]]
[[Category: Arrowsmith CH]]
[[Category: Arrowsmith, C H.]]
[[Category: Christendat D]]
[[Category: Christendat, D.]]
[[Category: Dharamsi A]]
[[Category: Dharamsi, A.]]
[[Category: Edwards AM]]
[[Category: Edwards, A M.]]
[[Category: Joachimiak A]]
[[Category: Joachimiak, A.]]
[[Category: Kim Y]]
[[Category: Kim, Y.]]
[[Category: Peterson K]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Zarembinski TI]]
[[Category: Peterson, K.]]
[[Category: Zarembinski, T I.]]
[[Category: beta barrel]]
[[Category: mcsg]]
[[Category: midwest center for structural genomic]]
[[Category: protein structure initiative]]
[[Category: psi]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 05:54:42 2008''
Retrieved from "https://proteopedia.org/1k3r"