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[[Image:1zcc.gif|left|200px]]


{{Structure
==Crystal structure of glycerophosphodiester phosphodiesterase from Agrobacterium tumefaciens str.C58==
|PDB= 1zcc |SIZE=350|CAPTION= <scene name='initialview01'>1zcc</scene>, resolution 2.50&Aring;
<StructureSection load='1zcc' size='340' side='right'caption='[[1zcc]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
<table><tr><td colspan='2'>[[1zcc]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZCC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ZCC FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
|GENE=
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam03009 GDPD], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0584 UgpQ]</span>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1zcc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zcc OCA], [https://pdbe.org/1zcc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1zcc RCSB], [https://www.ebi.ac.uk/pdbsum/1zcc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1zcc ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/1zcc TOPSAN]</span></td></tr>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1zcc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zcc OCA], [http://www.ebi.ac.uk/pdbsum/1zcc PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=1zcc RCSB]</span>
</table>
}}
== Function ==
[https://www.uniprot.org/uniprot/A9CG82_AGRFC A9CG82_AGRFC]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zc/1zcc_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1zcc ConSurf].
<div style="clear:both"></div>


'''Crystal structure of glycerophosphodiester phosphodiesterase from Agrobacterium tumefaciens str.C58'''
==See Also==
 
*[[Phosphodiesterase 3D structures|Phosphodiesterase 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
1ZCC is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens Agrobacterium tumefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZCC OCA].
[[Category: Agrobacterium fabrum str. C58]]
 
[[Category: Large Structures]]
==Reference==
[[Category: Burley SK]]
Crystal structure of glycerophosphodiester phosphodiesterase from Agrobacterium tumefaciens by SAD with a large asymmetric unit., Rao KN, Bonanno JB, Burley SK, Swaminathan S, Proteins. 2006 Nov 1;65(2):514-8. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16909422 16909422]
[[Category: Krishnamurthy NR]]
[[Category: Agrobacterium tumefaciens]]
[[Category: Kumaran D]]
[[Category: Single protein]]
[[Category: Swaminathan S]]
[[Category: Burley, S K.]]
[[Category: Krishnamurthy, N R.]]
[[Category: Kumaran, D.]]
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
[[Category: Swaminathan, S.]]
[[Category: agrobacterium tumefaciens str. c58]]
[[Category: glycerophosphodiester phosphodiesterase]]
[[Category: new york structural genomix research consortium]]
[[Category: nysgxrc]]
[[Category: protein structure initiative]]
[[Category: psi]]
[[Category: structural genomic]]
[[Category: t2047]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:17:59 2008''

Latest revision as of 09:03, 14 February 2024

Crystal structure of glycerophosphodiester phosphodiesterase from Agrobacterium tumefaciens str.C58

1zcc, resolution 2.50Å

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