1zd0: Difference between revisions

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[[Image:1zd0.gif|left|200px]]


{{Structure
==Crystal structure of Pfu-542154 conserved hypothetical protein==
|PDB= 1zd0 |SIZE=350|CAPTION= <scene name='initialview01'>1zd0</scene>, resolution 1.700&Aring;
<StructureSection load='1zd0' size='340' side='right'caption='[[1zd0]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MOH:METHANOL'>MOH</scene>, <scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene>
<table><tr><td colspan='2'>[[1zd0]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZD0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ZD0 FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
|GENE= PF0523 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2261 Pyrococcus furiosus])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MOH:METHANOL'>MOH</scene>, <scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam04416 DUF509]</span>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1zd0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zd0 OCA], [https://pdbe.org/1zd0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1zd0 RCSB], [https://www.ebi.ac.uk/pdbsum/1zd0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1zd0 ProSAT], [https://www.topsan.org/Proteins/SECSG/1zd0 TOPSAN]</span></td></tr>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1zd0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zd0 OCA], [http://www.ebi.ac.uk/pdbsum/1zd0 PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=1zd0 RCSB]</span>
</table>
}}
== Function ==
 
[https://www.uniprot.org/uniprot/Q8U3E5_PYRFU Q8U3E5_PYRFU]
'''Crystal structure of Pfu-542154 conserved hypothetical protein'''
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
==About this Structure==
  <jmolCheckbox>
1ZD0 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZD0 OCA].  
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zd/1zd0_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1zd0 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Pyrococcus furiosus]]
[[Category: Pyrococcus furiosus]]
[[Category: Single protein]]
[[Category: Adams MWW]]
[[Category: Adams, M W.W.]]
[[Category: Bereton P]]
[[Category: Bereton, P.]]
[[Category: Chang SH]]
[[Category: Chang, S H.]]
[[Category: Chen L]]
[[Category: Chen, L.]]
[[Category: Florence QJT]]
[[Category: Florence, Q J.T.]]
[[Category: Habel JE]]
[[Category: Habel, J E.]]
[[Category: Horanyi PS]]
[[Category: Horanyi, P S.]]
[[Category: Izumi M]]
[[Category: II, F L.Poole.]]
[[Category: Jenny Jr FE]]
[[Category: Izumi, M.]]
[[Category: Lee D]]
[[Category: Jr., F E.Jenny.]]
[[Category: Liu ZJ]]
[[Category: Lee, D.]]
[[Category: Nguyen J]]
[[Category: Liu, Z J.]]
[[Category: Poole II FL]]
[[Category: Nguyen, J.]]
[[Category: Rose JP]]
[[Category: Rose, J P.]]
[[Category: Shah C]]
[[Category: SECSG, Southeast Collaboratory for Structural Genomics.]]
[[Category: Sugar FJ]]
[[Category: Shah, C.]]
[[Category: Tempel W]]
[[Category: Sugar, F J.]]
[[Category: Wang BC]]
[[Category: Tempel, W.]]
[[Category: Zhou W]]
[[Category: Wang, B C.]]
[[Category: Zhou, W.]]
[[Category: protein structure initiative]]
[[Category: psi]]
[[Category: secsg]]
[[Category: southeast collaboratory for structural genomic]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:18:02 2008''

Latest revision as of 08:10, 15 May 2024

Crystal structure of Pfu-542154 conserved hypothetical protein

1zd0, resolution 1.70Å

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