1oy5: Difference between revisions
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==Crystal structure of tRNA (m1G37) methyltransferase from Aquifex aeolicus== | ==Crystal structure of tRNA (m1G37) methyltransferase from Aquifex aeolicus== | ||
<StructureSection load='1oy5' size='340' side='right' caption='[[1oy5]], [[Resolution|resolution]] 2.60Å' scene=''> | <StructureSection load='1oy5' size='340' side='right'caption='[[1oy5]], [[Resolution|resolution]] 2.60Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[1oy5]] is a 3 chain structure with sequence from [ | <table><tr><td colspan='2'>[[1oy5]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OY5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1OY5 FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6Å</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1oy5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1oy5 OCA], [https://pdbe.org/1oy5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1oy5 RCSB], [https://www.ebi.ac.uk/pdbsum/1oy5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1oy5 ProSAT], [https://www.topsan.org/Proteins/BSGC/1oy5 TOPSAN]</span></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | |||
</table> | </table> | ||
== Function == | == Function == | ||
[ | [https://www.uniprot.org/uniprot/TRMD_AQUAE TRMD_AQUAE] Specifically methylates guanosine-37 in various tRNAs (By similarity).[HAMAP-Rule:MF_00605] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oy/1oy5_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oy/1oy5_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1oy5 ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
*[[TRNA methyltransferase|TRNA methyltransferase]] | *[[TRNA methyltransferase 3D structures|TRNA methyltransferase 3D structures]] | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Aquifex aeolicus | [[Category: Aquifex aeolicus]] | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: Kim R]] | |||
[[Category: Kim | [[Category: Kim SH]] | ||
[[Category: Kim | [[Category: Liu J]] | ||
[[Category: Liu | [[Category: Shin DH]] | ||
[[Category: Shin | [[Category: Wang W]] | ||
[[Category: Wang | [[Category: Yokota H]] | ||
[[Category: Yokota | |||
Latest revision as of 07:10, 30 October 2024
Crystal structure of tRNA (m1G37) methyltransferase from Aquifex aeolicus
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