2jpu: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(13 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2jpu.jpg|left|200px]]


{{Structure
==solution structure of NESG target SsR10, Orf c02003 protein==
|PDB= 2jpu |SIZE=350|CAPTION= <scene name='initialview01'>2jpu</scene>
<StructureSection load='2jpu' size='340' side='right'caption='[[2jpu]]' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND=  
<table><tr><td colspan='2'>[[2jpu]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharolobus_solfataricus Saccharolobus solfataricus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JPU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JPU FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
|GENE= orf c02003 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2287 Sulfolobus solfataricus])
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jpu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jpu OCA], [https://pdbe.org/2jpu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jpu RCSB], [https://www.ebi.ac.uk/pdbsum/2jpu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jpu ProSAT], [https://www.topsan.org/Proteins/NESGC/2jpu TOPSAN]</span></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam05942 PaREP1]</span>
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2jpu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jpu OCA], [http://www.ebi.ac.uk/pdbsum/2jpu PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=2jpu RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/P95883_SACSO P95883_SACSO]
 
== Evolutionary Conservation ==
'''solution structure of NESG target SsR10, Orf c02003 protein'''
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
 
  <jmolCheckbox>
==About this Structure==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jp/2jpu_consurf.spt"</scriptWhenChecked>
2JPU is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Sulfolobus_solfataricus Sulfolobus solfataricus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JPU OCA].  
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Single protein]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Sulfolobus solfataricus]]
  </jmolCheckbox>
[[Category: Acton, T.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2jpu ConSurf].
[[Category: Baran, M.]]
<div style="clear:both"></div>
[[Category: Cunningham, K.]]
__TOC__
[[Category: Eletski, A.]]
</StructureSection>
[[Category: Jiang, M.]]
[[Category: Large Structures]]
[[Category: Liu, J.]]
[[Category: Saccharolobus solfataricus]]
[[Category: Maglaqui, M.]]
[[Category: Acton T]]
[[Category: Montelione, G.]]
[[Category: Baran M]]
[[Category: NESG, Northeast Structural Genomics Consortium.]]
[[Category: Cunningham K]]
[[Category: Owens, L.]]
[[Category: Eletski A]]
[[Category: Parish, D.]]
[[Category: Jiang M]]
[[Category: Rost, B.]]
[[Category: Liu J]]
[[Category: Singarapu, K K.]]
[[Category: Maglaqui M]]
[[Category: Sukumaran, D.]]
[[Category: Montelione G]]
[[Category: Swapna, G V.T.]]
[[Category: Owens L]]
[[Category: Szyperski, T.]]
[[Category: Parish D]]
[[Category: Wang, D.]]
[[Category: Rost B]]
[[Category: Wu, Y.]]
[[Category: Singarapu KK]]
[[Category: Xiao, R.]]
[[Category: Sukumaran D]]
[[Category: Xu, D.]]
[[Category: Swapna GVT]]
[[Category: Zhang, Q.]]
[[Category: Szyperski T]]
[[Category: nesg]]
[[Category: Wang D]]
[[Category: nmr]]
[[Category: Wu Y]]
[[Category: northeast structural genomics consortium]]
[[Category: Xiao R]]
[[Category: protein structure initiative]]
[[Category: Xu D]]
[[Category: psi-2]]
[[Category: Zhang Q]]
[[Category: solution structure]]
[[Category: ssr10]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:33:24 2008''