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[[Image:2pbz.gif|left|200px]]


{{Structure
==Crystal structure of an IMP biosynthesis protein PurP from Thermococcus kodakaraensis==
|PDB= 2pbz |SIZE=350|CAPTION= <scene name='initialview01'>2pbz</scene>, resolution 2.50&Aring;
<StructureSection load='2pbz' size='340' side='right'caption='[[2pbz]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=ATP:ADENOSINE-5&#39;-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PBZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PBZ FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
|GENE= PurP, TK0431 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=311400 Thermococcus kodakarensis])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam06973 DUF1297], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam06849 DUF1246]</span>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pbz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pbz OCA], [https://pdbe.org/2pbz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pbz RCSB], [https://www.ebi.ac.uk/pdbsum/2pbz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pbz ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2pbz TOPSAN]</span></td></tr>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2pbz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pbz OCA], [http://www.ebi.ac.uk/pdbsum/2pbz PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=2pbz RCSB]</span>
</table>
}}
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
'''Crystal structure of an IMP biosynthesis protein PurP from Thermococcus kodakaraensis'''
Check<jmol>
 
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pb/2pbz_consurf.spt"</scriptWhenChecked>
==About this Structure==
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
2PBZ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermococcus_kodakarensis Thermococcus kodakarensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PBZ OCA].  
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Single protein]]
  </jmolCheckbox>
[[Category: Thermococcus kodakarensis]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pbz ConSurf].
[[Category: Agarwal, R.]]
<div style="clear:both"></div>
[[Category: Burley, S K.]]
__TOC__
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
</StructureSection>
[[Category: Swaminathan, S.]]
[[Category: Large Structures]]
[[Category: 10188d]]
[[Category: Agarwal R]]
[[Category: atp binding protein]]
[[Category: Burley SK]]
[[Category: crystal structure]]
[[Category: Swaminathan S]]
[[Category: imp biosynthesis]]
[[Category: new york structural genomix research consortium]]
[[Category: nysgxrc]]
[[Category: protein structure initiative]]
[[Category: psi-ii]]
[[Category: purp]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:39:13 2008''

Latest revision as of 01:18, 21 November 2024

Crystal structure of an IMP biosynthesis protein PurP from Thermococcus kodakaraensis

2pbz, resolution 2.50Å

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