2pgx: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
 
(12 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2pgx.gif|left|200px]]


{{Structure
==Crystal structure of UPF0341 protein yhiQ from E. coli, Northeast Structural Genomics Target ER585==
|PDB= 2pgx |SIZE=350|CAPTION= <scene name='initialview01'>2pgx</scene>, resolution 2.00&Aring;
<StructureSection load='2pgx' size='340' side='right'caption='[[2pgx]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
<table><tr><td colspan='2'>[[2pgx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_O157:H7 Escherichia coli O157:H7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PGX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PGX FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
|GENE= yhiQ, Z4897, ECs4369 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83334 Escherichia coli O157:H7])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK10742 PRK10742]</span>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pgx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pgx OCA], [https://pdbe.org/2pgx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pgx RCSB], [https://www.ebi.ac.uk/pdbsum/2pgx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pgx ProSAT], [https://www.topsan.org/Proteins/NESGC/2pgx TOPSAN]</span></td></tr>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2pgx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pgx OCA], [http://www.ebi.ac.uk/pdbsum/2pgx PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=2pgx RCSB]</span>
</table>
}}
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
'''Crystal structure of UPF0341 protein yhiQ from E. coli, Northeast Structural Genomics Target ER585'''
Check<jmol>
 
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pg/2pgx_consurf.spt"</scriptWhenChecked>
==About this Structure==
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
2PGX is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_o157:h7 Escherichia coli o157:h7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PGX OCA].  
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Escherichia coli o157:h7]]
  </jmolCheckbox>
[[Category: Single protein]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pgx ConSurf].
[[Category: Acton, T B.]]
<div style="clear:both"></div>
[[Category: Baran, M C.]]
__TOC__
[[Category: Fang, Y.]]
</StructureSection>
[[Category: Forouhar, F.]]
[[Category: Escherichia coli O157:H7]]
[[Category: Hunt, J F.]]
[[Category: Large Structures]]
[[Category: Janjua, H.]]
[[Category: Acton TB]]
[[Category: Liu, J.]]
[[Category: Baran MC]]
[[Category: Montelione, G T.]]
[[Category: Fang Y]]
[[Category: NESG, Northeast Structural Genomics Consortium.]]
[[Category: Forouhar F]]
[[Category: Seetharaman, J.]]
[[Category: Hunt JF]]
[[Category: Su, M.]]
[[Category: Janjua H]]
[[Category: Tong, L.]]
[[Category: Liu J]]
[[Category: Xiao, R.]]
[[Category: Montelione GT]]
[[Category: alpha-beta protein]]
[[Category: Seetharaman J]]
[[Category: nesg]]
[[Category: Su M]]
[[Category: northeast structural genomics consortium]]
[[Category: Tong L]]
[[Category: protein structure initiative]]
[[Category: Xiao R]]
[[Category: psi-2]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:39:32 2008''

Latest revision as of 01:18, 21 November 2024

Crystal structure of UPF0341 protein yhiQ from E. coli, Northeast Structural Genomics Target ER585

2pgx, resolution 2.00Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "https://proteopedia.org/index.php?title=2pgx&oldid=4270758"