2qti: Difference between revisions

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[[Image:2qti.jpg|left|200px]]


{{Structure
==Crystal structure of the UPF0352 protein SO_2176 from Shewanella oneidensis. NESG target SoR77.==
|PDB= 2qti |SIZE=350|CAPTION= <scene name='initialview01'>2qti</scene>, resolution 2.30&Aring;
<StructureSection load='2qti' size='340' side='right'caption='[[2qti]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
<table><tr><td colspan='2'>[[2qti]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Shewanella_oneidensis_MR-1 Shewanella oneidensis MR-1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QTI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QTI FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
|GENE= SO_2176 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=70863 Shewanella oneidensis])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam07208 DUF1414]</span>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qti FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qti OCA], [https://pdbe.org/2qti PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qti RCSB], [https://www.ebi.ac.uk/pdbsum/2qti PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qti ProSAT], [https://www.topsan.org/Proteins/NESGC/2qti TOPSAN]</span></td></tr>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qti FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qti OCA], [http://www.ebi.ac.uk/pdbsum/2qti PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=2qti RCSB]</span>
</table>
}}
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
'''Crystal structure of the UPF0352 protein SO_2176 from Shewanella oneidensis. NESG target SoR77.'''
Check<jmol>
 
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qt/2qti_consurf.spt"</scriptWhenChecked>
==About this Structure==
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
2QTI is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Shewanella_oneidensis Shewanella oneidensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QTI OCA].  
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Shewanella oneidensis]]
  </jmolCheckbox>
[[Category: Single protein]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qti ConSurf].
[[Category: Acton, T B.]]
<div style="clear:both"></div>
[[Category: Cunningham, K.]]
__TOC__
[[Category: Fang, Y.]]
</StructureSection>
[[Category: Hunt, J F.]]
[[Category: Large Structures]]
[[Category: Kuzin, A P.]]
[[Category: Shewanella oneidensis MR-1]]
[[Category: Maglaqui, M.]]
[[Category: Acton TB]]
[[Category: Montelione, G T.]]
[[Category: Cunningham K]]
[[Category: NESG, Northeast Structural Genomics Consortium.]]
[[Category: Fang Y]]
[[Category: Owens, L.]]
[[Category: Hunt JF]]
[[Category: Seetharaman, J.]]
[[Category: Kuzin AP]]
[[Category: Su, M.]]
[[Category: Maglaqui M]]
[[Category: Tong, L.]]
[[Category: Montelione GT]]
[[Category: Vorobiev, S M.]]
[[Category: Owens L]]
[[Category: Wang, D.]]
[[Category: Seetharaman J]]
[[Category: Xiao, R.]]
[[Category: Su M]]
[[Category: nesg]]
[[Category: Tong L]]
[[Category: northeast structural genomics consortium]]
[[Category: Vorobiev SM]]
[[Category: pf07208]]
[[Category: Wang D]]
[[Category: protein structure initiative]]
[[Category: Xiao R]]
[[Category: psi-2]]
[[Category: so_2176]]
[[Category: sor77]]
[[Category: structural genomic]]
[[Category: unknown function]]
[[Category: upf0352]]
[[Category: y2176_sheon]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:44:11 2008''

Latest revision as of 01:22, 21 November 2024

Crystal structure of the UPF0352 protein SO_2176 from Shewanella oneidensis. NESG target SoR77.

2qti, resolution 2.30Å

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