5exx: Difference between revisions

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~~'''Unreleased structure'''~~

~~The entry~~ 5exx is ~~ON HOLD until sometime in~~ the ~~future~~

==AAA+ ATPase FleQ from Pseudomonas aeruginosa bound to c-di-GMP==

~~Authors~~: ~~Navarro~~, M.V.A.S., ~~Sondermann~~, H., ~~Matsuyama, B~~., ~~Krasteva, P~~.V.

== Structural highlights ==

<table><tr><td colspan='2'>[[5exx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5EXX OCA]. For a guided tour on the structure components use [https://proteopedia.org/fgij/fg.htm?mol=5EXX FirstGlance].

~~Description~~: AAA+ ATPase ~~FleQ from Pseudomonas aeruginosa bound~~ to c-di-GMP

</td></tr><tr id='method'><td class="sblockLbl">[[Empirical_models|Method:]]</td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.311Å</td></tr>

[[Category: ~~Unreleased~~ Structures]]

<tr id='ligand'><td class="sblockLbl">[[Ligand|Ligands:]]</td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=C2E:9,9-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d 3,2-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one)'>C2E</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>

[[Category: ~~Navarro, M.V.A.S~~]]

<tr id='resources'><td class="sblockLbl">Resources:</td><td class="sblockDat">[https://proteopedia.org/fgij/fg.htm?mol=5exx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5exx OCA], [https://pdbe.org/5exx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5exx RCSB], [https://www.ebi.ac.uk/pdbsum/5exx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5exx ProSAT]</td></tr>

[[Category: ~~Sondermann, H~~]]

</table>

[[Category: ~~Matsuyama, B~~]]

== Function ==

[[Category: ~~Krasteva, P.V~~]]

[https://www.uniprot.org/uniprot/FLEQ_PSEAE FLEQ_PSEAE] AAA+ ATPase enhancer-binding protein that acts as a transcription regulator and plays a role in the modulation of mucin adhesion and flagellar gene expression (PubMed:9287015, PubMed:11673434, PubMed:26362077). In addition to flagella genes, regulates also expression of biofilm-related genes (PubMed:22581773). Functions as a transcriptional repressor in the absence of c-di-GMP and as an activator when c-di-GMP is present (PubMed:22581773).<ref>PMID:11673434</ref> <ref>PMID:22581773</ref> <ref>PMID:26362077</ref> <ref>PMID:9287015</ref>

== References ==

__TOC__

</StructureSection>

[[Category: Large Structures]]

[[Category: Pseudomonas aeruginosa PAO1]]

[[Category: Krasteva PV]]

[[Category: Navarro MVAS]]

[[Category: Sondermann H]]

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@@ Line 1: / Line 1: @@
-'''Unreleased structure'''
-The entry 5exx is ON HOLD  until sometime in the future
+==AAA+ ATPase FleQ from Pseudomonas aeruginosa bound to c-di-GMP==
+<StructureSection load='5exx' size='340' side='right'caption='[[5exx]], [[Resolution|resolution]] 3.31&Aring;' scene=''>
-Authors: Navarro, M.V.A.S., Sondermann, H., Matsuyama, B., Krasteva, P.V.
+== Structural highlights ==
+<table><tr><td colspan='2'>[[5exx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5EXX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5EXX FirstGlance]. <br>
-Description: AAA+ ATPase FleQ from Pseudomonas aeruginosa bound to c-di-GMP
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.311&#8491;</td></tr>
-[[Category: Unreleased Structures]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=C2E:9,9-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d 3,2-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one)'>C2E</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-[[Category: Navarro, M.V.A.S]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5exx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5exx OCA], [https://pdbe.org/5exx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5exx RCSB], [https://www.ebi.ac.uk/pdbsum/5exx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5exx ProSAT]</span></td></tr>
-[[Category: Sondermann, H]]
+</table>
-[[Category: Matsuyama, B]]
+== Function ==
-[[Category: Krasteva, P.V]]
+[https://www.uniprot.org/uniprot/FLEQ_PSEAE FLEQ_PSEAE] AAA+ ATPase enhancer-binding protein that acts as a transcription regulator and plays a role in the modulation of mucin adhesion and flagellar gene expression (PubMed:9287015, PubMed:11673434, PubMed:26362077). In addition to flagella genes, regulates also expression of biofilm-related genes (PubMed:22581773). Functions as a transcriptional repressor in the absence of c-di-GMP and as an activator when c-di-GMP is present (PubMed:22581773).<ref>PMID:11673434</ref> <ref>PMID:22581773</ref> <ref>PMID:26362077</ref> <ref>PMID:9287015</ref>
+== References ==
+<references/>
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
+[[Category: Pseudomonas aeruginosa PAO1]]
+[[Category: Krasteva PV]]
+[[Category: Navarro MVAS]]
+[[Category: Sondermann H]]