1wmp: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
==Crystal structure of amine oxidase complexed with cobalt ion==
==Crystal structure of amine oxidase complexed with cobalt ion==
<StructureSection load='1wmp' size='340' side='right' caption='[[1wmp]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='1wmp' size='340' side='right'caption='[[1wmp]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1wmp]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"achromobacter_globiformis"_(conn_1928)_bergey_et_al._1930 "achromobacter globiformis" (conn 1928) bergey et al. 1930]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WMP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1WMP FirstGlance]. <br>
<table><tr><td colspan='2'>[[1wmp]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Arthrobacter_globiformis Arthrobacter globiformis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WMP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WMP FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1iu7|1iu7]], [[1iqx|1iqx]], [[1iqy|1iqy]], [[1wmn|1wmn]], [[1wmo|1wmo]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Oxidoreductase Oxidoreductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.4.3.21 and 1.4.3.22 1.4.3.21 and 1.4.3.22] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wmp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wmp OCA], [https://pdbe.org/1wmp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wmp RCSB], [https://www.ebi.ac.uk/pdbsum/1wmp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wmp ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1wmp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wmp OCA], [http://pdbe.org/1wmp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1wmp RCSB], [http://www.ebi.ac.uk/pdbsum/1wmp PDBsum]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/PAOX_ARTGO PAOX_ARTGO]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wm/1wmp_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wm/1wmp_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
Line 27: Line 29:
</div>
</div>
<div class="pdbe-citations 1wmp" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 1wmp" style="background-color:#fffaf0;"></div>
==See Also==
*[[Copper amine oxidase 3D structures|Copper amine oxidase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Oxidoreductase]]
[[Category: Arthrobacter globiformis]]
[[Category: Chiu, Y C]]
[[Category: Large Structures]]
[[Category: Hirota, S]]
[[Category: Chiu YC]]
[[Category: Kim, M]]
[[Category: Hirota S]]
[[Category: Kishishita, S]]
[[Category: Kim M]]
[[Category: Kuroda, S]]
[[Category: Kishishita S]]
[[Category: Murakawa, T]]
[[Category: Kuroda S]]
[[Category: Okajima, T]]
[[Category: Murakawa T]]
[[Category: Tanizawa, K]]
[[Category: Okajima T]]
[[Category: Yamaguchi, H]]
[[Category: Tanizawa K]]
[[Category: Amine oxidase]]
[[Category: Yamaguchi H]]
[[Category: Biogenesis]]
[[Category: Cobalt]]
[[Category: Intermediate]]
[[Category: Topaquinone]]

Latest revision as of 04:59, 17 October 2024

Crystal structure of amine oxidase complexed with cobalt ion

1wmp, resolution 2.00Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA