1kx7: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
==Family of 30 conformers of a mono-heme ferrocytochrome c from Shewanella putrefaciens solved by NMR==
==Family of 30 conformers of a mono-heme ferrocytochrome c from Shewanella putrefaciens solved by NMR==
<StructureSection load='1kx7' size='340' side='right' caption='[[1kx7]], [[NMR_Ensembles_of_Models | 30 NMR models]]' scene=''>
<StructureSection load='1kx7' size='340' side='right'caption='[[1kx7]]' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1kx7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"pseudomonas_putrefaciens"_(derby_and_hammer)_long_and_hammer_1941 "pseudomonas putrefaciens" (derby and hammer) long and hammer 1941]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KX7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1KX7 FirstGlance]. <br>
<table><tr><td colspan='2'>[[1kx7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Shewanella_putrefaciens Shewanella putrefaciens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KX7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1KX7 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEC:HEME+C'>HEC</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR,  models</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1kx2|1kx2]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEC:HEME+C'>HEC</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ScyA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=24 "Pseudomonas putrefaciens" (Derby and Hammer) Long and Hammer 1941])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1kx7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1kx7 OCA], [https://pdbe.org/1kx7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1kx7 RCSB], [https://www.ebi.ac.uk/pdbsum/1kx7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1kx7 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1kx7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1kx7 OCA], [http://pdbe.org/1kx7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1kx7 RCSB], [http://www.ebi.ac.uk/pdbsum/1kx7 PDBsum]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/O52685_SHEPU O52685_SHEPU]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kx/1kx7_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kx/1kx7_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
Line 31: Line 33:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Bartalesi, I]]
[[Category: Large Structures]]
[[Category: Bertini, I]]
[[Category: Shewanella putrefaciens]]
[[Category: Hajieva, P]]
[[Category: Bartalesi I]]
[[Category: Rosato, A]]
[[Category: Bertini I]]
[[Category: Vasos, P R]]
[[Category: Hajieva P]]
[[Category: All-alpha]]
[[Category: Rosato A]]
[[Category: Bacteria]]
[[Category: Vasos PR]]
[[Category: Electron transport]]
[[Category: Ferrocytochrome]]
[[Category: Gram negative]]
[[Category: Haem protein]]
[[Category: Mono haem]]
[[Category: Oxygen storage-transport complex]]
[[Category: Scya shewanella putrefacien]]