1dsv: Difference between revisions
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==STRUCTURE OF THE MMTV NUCLEOCAPSID PROTEIN (C-TERMINAL ZINC FINGER)== | ==STRUCTURE OF THE MMTV NUCLEOCAPSID PROTEIN (C-TERMINAL ZINC FINGER)== | ||
<StructureSection load='1dsv' size='340' side='right' caption='[[1dsv | <StructureSection load='1dsv' size='340' side='right'caption='[[1dsv]]' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[1dsv]] is a 1 chain structure with sequence from [ | <table><tr><td colspan='2'>[[1dsv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mouse_mammary_tumor_virus Mouse mammary tumor virus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DSV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DSV FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> | ||
<tr id=' | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dsv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dsv OCA], [https://pdbe.org/1dsv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dsv RCSB], [https://www.ebi.ac.uk/pdbsum/1dsv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dsv ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
[ | [https://www.uniprot.org/uniprot/GAG_MMTVC GAG_MMTVC] p10 is the matrix protein. P14 is the nucleocapsid protein. Binds to single stranded DNA. p27 is the capsid protein. | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ds/1dsv_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ds/1dsv_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: | [[Category: Mouse mammary tumor virus]] | ||
[[Category: | [[Category: De Guzman RN]] | ||
[[Category: | [[Category: Johnson PE]] | ||
[[Category: | [[Category: Klein DJ]] | ||
[[Category: | [[Category: Summers MF]] | ||
[[Category: | [[Category: Zollars ES]] | ||