2p0g: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
==Crystal structure of Selenoprotein W-related protein from Vibrio cholerae. Northeast Structural Genomics target VcR75==
==Crystal structure of Selenoprotein W-related protein from Vibrio cholerae. Northeast Structural Genomics target VcR75==
<StructureSection load='2p0g' size='340' side='right' caption='[[2p0g]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
<StructureSection load='2p0g' size='340' side='right'caption='[[2p0g]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2p0g]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillo_virgola_del_koch"_trevisan_1884 "bacillo virgola del koch" trevisan 1884]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P0G OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2P0G FirstGlance]. <br>
<table><tr><td colspan='2'>[[2p0g]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P0G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P0G FirstGlance]. <br>
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">VC0982 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=666 "Bacillo virgola del Koch" Trevisan 1884])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2p0g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p0g OCA], [http://pdbe.org/2p0g PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2p0g RCSB], [http://www.ebi.ac.uk/pdbsum/2p0g PDBsum], [http://www.topsan.org/Proteins/NESGC/2p0g TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p0g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p0g OCA], [https://pdbe.org/2p0g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p0g RCSB], [https://www.ebi.ac.uk/pdbsum/2p0g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p0g ProSAT], [https://www.topsan.org/Proteins/NESGC/2p0g TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q9KTC1_VIBCH Q9KTC1_VIBCH]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p0/2p0g_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p0/2p0g_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
Line 19: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Bacillo virgola del koch trevisan 1884]]
[[Category: Large Structures]]
[[Category: Acton, T B]]
[[Category: Vibrio cholerae]]
[[Category: Baran, M C]]
[[Category: Acton TB]]
[[Category: Benach, J]]
[[Category: Baran MC]]
[[Category: Cunningham, K]]
[[Category: Benach J]]
[[Category: Ho, C K]]
[[Category: Cunningham K]]
[[Category: Hunt, J F]]
[[Category: Ho CK]]
[[Category: Janjua, H]]
[[Category: Hunt JF]]
[[Category: Liu, J]]
[[Category: Janjua H]]
[[Category: Ma, L]]
[[Category: Liu J]]
[[Category: Montelione, G T]]
[[Category: Ma L]]
[[Category: Structural genomic]]
[[Category: Montelione GT]]
[[Category: Neely, H]]
[[Category: Neely H]]
[[Category: Rost, B]]
[[Category: Rost B]]
[[Category: Seetharaman, J]]
[[Category: Seetharaman J]]
[[Category: Tong, L]]
[[Category: Tong L]]
[[Category: Xiao, R]]
[[Category: Xiao R]]
[[Category: Nesg]]
[[Category: PSI, Protein structure initiative]]
[[Category: Unknown function]]
[[Category: Vcr75]]

Latest revision as of 07:44, 9 October 2024

Crystal structure of Selenoprotein W-related protein from Vibrio cholerae. Northeast Structural Genomics target VcR75

2p0g, resolution 2.30Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA