3e1g: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,418 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,418 edits
No edit summary
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
==Snapshots of esterase D from lactobacillus rhamnosus: Insights into a rotation driven catalytic mechanism==
==Snapshots of esterase D from lactobacillus rhamnosus: Insights into a rotation driven catalytic mechanism==
<StructureSection load='3e1g' size='340' side='right' caption='[[3e1g]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
<StructureSection load='3e1g' size='340' side='right'caption='[[3e1g]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3e1g]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Lactobacillus_rhamnosus_hn001 Lactobacillus rhamnosus hn001]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E1G OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3E1G FirstGlance]. <br>
<table><tr><td colspan='2'>[[3e1g]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Lacticaseibacillus_rhamnosus_HN001 Lacticaseibacillus rhamnosus HN001]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E1G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3E1G FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DEP:DIETHYL+PHOSPHONATE'>DEP</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3dkr|3dkr]], [[3dlt|3dlt]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DEP:DIETHYL+PHOSPHONATE'>DEP</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">EstD ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=486408 Lactobacillus rhamnosus HN001])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3e1g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3e1g OCA], [https://pdbe.org/3e1g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3e1g RCSB], [https://www.ebi.ac.uk/pdbsum/3e1g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3e1g ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3e1g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3e1g OCA], [http://pdbe.org/3e1g PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3e1g RCSB], [http://www.ebi.ac.uk/pdbsum/3e1g PDBsum]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/B2CZF3_LACRH B2CZF3_LACRH]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e1/3e1g_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e1/3e1g_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
Line 20: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Lactobacillus rhamnosus hn001]]
[[Category: Lacticaseibacillus rhamnosus HN001]]
[[Category: Bennett, M D]]
[[Category: Large Structures]]
[[Category: Delabre, M L]]
[[Category: Bennett MD]]
[[Category: Holland, R]]
[[Category: Delabre M-L]]
[[Category: Norris, G E]]
[[Category: Holland R]]
[[Category: Alpha beta hydrolase]]
[[Category: Norris GE]]
[[Category: Catalytic triad]]
[[Category: Esterase]]
[[Category: Hydrolase]]
[[Category: Rotation]]
Retrieved from "https://proteopedia.org/3e1g"