2kcd: Difference between revisions

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==Solution NMR structure of SSP0047 from Staphylococcus saprophyticus. Northeast Structural Genomics Consortium Target SyR6.==
==Solution NMR structure of SSP0047 from Staphylococcus saprophyticus. Northeast Structural Genomics Consortium Target SyR6.==
<StructureSection load='2kcd' size='340' side='right' caption='[[2kcd]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
<StructureSection load='2kcd' size='340' side='right'caption='[[2kcd]]' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2kcd]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Stas1 Stas1]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KCD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2KCD FirstGlance]. <br>
<table><tr><td colspan='2'>[[2kcd]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305_=_NCTC_7292 Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 = NCTC 7292]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KCD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KCD FirstGlance]. <br>
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SSP0047 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=342451 STAS1])</td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2kcd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kcd OCA], [http://pdbe.org/2kcd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2kcd RCSB], [http://www.ebi.ac.uk/pdbsum/2kcd PDBsum], [http://www.topsan.org/Proteins/NESGC/2kcd TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kcd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kcd OCA], [https://pdbe.org/2kcd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kcd RCSB], [https://www.ebi.ac.uk/pdbsum/2kcd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kcd ProSAT], [https://www.topsan.org/Proteins/NESGC/2kcd TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q4A134_STAS1 Q4A134_STAS1]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kc/2kcd_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kc/2kcd_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Stas1]]
[[Category: Large Structures]]
[[Category: Acton, T B]]
[[Category: Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 = NCTC 7292]]
[[Category: Baran, M C]]
[[Category: Acton TB]]
[[Category: Chen, C X]]
[[Category: Baran MC]]
[[Category: Ciccosanti, C]]
[[Category: Chen CX]]
[[Category: Ding, K]]
[[Category: Ciccosanti C]]
[[Category: Jiang, M]]
[[Category: Ding K]]
[[Category: Kennedy, M A]]
[[Category: Jiang M]]
[[Category: Liu, J]]
[[Category: Kennedy MA]]
[[Category: Montelione, G T]]
[[Category: Liu J]]
[[Category: Structural genomic]]
[[Category: Montelione GT]]
[[Category: Ramelot, T A]]
[[Category: Ramelot TA]]
[[Category: Rost, B]]
[[Category: Rost B]]
[[Category: Swapna, G]]
[[Category: Swapna G]]
[[Category: Xiao, R]]
[[Category: Xiao R]]
[[Category: Alpha beta]]
[[Category: Nesg]]
[[Category: PSI, Protein structure initiative]]
[[Category: Unknown function]]