5drp: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:


==Structure of the AaLpxC/LPC-023 Complex==
==Structure of the AaLpxC/LPC-023 Complex==
<StructureSection load='5drp' size='340' side='right' caption='[[5drp]], [[Resolution|resolution]] 1.89&Aring;' scene=''>
<StructureSection load='5drp' size='340' side='right'caption='[[5drp]], [[Resolution|resolution]] 1.89&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5drp]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DRP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5DRP FirstGlance]. <br>
<table><tr><td colspan='2'>[[5drp]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus_VF5 Aquifex aeolicus VF5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DRP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5DRP FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=5EP:N~2~-{4-[4-(4-AMINOPHENYL)BUTA-1,3-DIYN-1-YL]BENZOYL}-N-HYDROXY-L-ISOLEUCINAMIDE'>5EP</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.889&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5dro|5dro]], [[5drq|5drq]], [[5drr|5drr]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5EP:N~2~-{4-[4-(4-AMINOPHENYL)BUTA-1,3-DIYN-1-YL]BENZOYL}-N-HYDROXY-L-ISOLEUCINAMIDE'>5EP</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5drp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5drp OCA], [http://pdbe.org/5drp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5drp RCSB], [http://www.ebi.ac.uk/pdbsum/5drp PDBsum]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5drp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5drp OCA], [https://pdbe.org/5drp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5drp RCSB], [https://www.ebi.ac.uk/pdbsum/5drp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5drp ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/LPXC_AQUAE LPXC_AQUAE]] Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell (By similarity).  
[https://www.uniprot.org/uniprot/LPXC_AQUAE LPXC_AQUAE] Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell (By similarity).
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 19: Line 19:
</div>
</div>
<div class="pdbe-citations 5drp" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5drp" style="background-color:#fffaf0;"></div>
==See Also==
*[[UDP-3-O-acyl-N-acetylglucosamine deacetylase|UDP-3-O-acyl-N-acetylglucosamine deacetylase]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Lee, C J]]
[[Category: Aquifex aeolicus VF5]]
[[Category: Najeeb, J]]
[[Category: Large Structures]]
[[Category: Zhou, P]]
[[Category: Lee C-J]]
[[Category: Gram-negative bacteria]]
[[Category: Najeeb J]]
[[Category: Hydrolase-hydrolase inhibitor complex]]
[[Category: Zhou P]]
[[Category: Inhibitor]]
[[Category: Lipid some]]
[[Category: Lpxc]]

Latest revision as of 21:56, 28 June 2023

Structure of the AaLpxC/LPC-023 Complex

5drp, resolution 1.89Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA